Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187511460 | . | G | A | CCDS2292.1:NM_002210.4:c.1207Gtt>Att_NP_002201.1:p.403V>I | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -112.8 | 125.6 | 0.0 | 0.0 | 0.0 | ||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -116.3 | 125.3 | 0.0 | 0.0 | 0.0 | ||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -119.8 | 123.9 | 0.0 | 0.0 | 0.0 | ||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -121.6 | 121.1 | 0.0 | 0.0 | 0.0 | ||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -130.1 | 124.0 | 0.0 | 0.0 | 0.0 | ||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -129.3 | 121.8 | 0.0 | 0.0 | 0.0 | ||||||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | VAL | A:373 | A:373 | 22.0 | NA | E | -107.0 | 123.3 | 22.0 | NA | NA | ||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | VAL | A:373 | A:373 | 8.0 | 0.052 | E | -121.6 | 120.9 | 8.0 | 0.052 | 0.0 | ||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -127.2 | 124.4 | 0.0 | 0.0 | 0.0 |
HOH |
8.597 |
N |
O |
||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -125.7 | 122.8 | 0.0 | 0.0 | 0.0 |
HOH |
9.466 |
CG2 |
O |
||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -128.8 | 115.6 | 0.0 | 0.0 | 0.0 | ||||||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -129.5 | 127.6 | 0.0 | 0.0 | 0.0 | ||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -114.9 | 125.0 | 0.0 | 0.0 | 0.0 | ||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | VAL | A:373 | A:373 | 17.0 | NA | E | -113.6 | 120.7 | 17.0 | NA | NA | ||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | VAL | A:373 | A:373 | 19.0 | NA | E | -112.9 | 121.1 | 19.0 | NA | NA | ||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | VAL | A:373 | A:373 | 18.0 | NA | E | -111.7 | 121.8 | 18.0 | NA | NA | ||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -130.1 | 114.3 | 0.0 | 0.0 | 0.0 | ||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -110.6 | 120.1 | 0.0 | 0.0 | 0.0 | ||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -123.9 | 127.2 | 0.0 | 0.0 | 0.0 | ||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -121.7 | 129.7 | 0.0 | 0.0 | 0.0 | ||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -131.4 | 123.5 | 0.0 | 0.0 | 0.0 | ||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -119.2 | 120.7 | 0.0 | 0.0 | 0.0 | ||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -119.3 | 123.6 | 0.0 | 0.0 | 0.0 |
HOH |
8.451 |
N |
O |
||
| VAL | C:373 | C:373 | 0.0 | 0.0 | E | -120.0 | 122.9 | NA | NA | NA | |||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -122.9 | 127.9 | NA | NA | NA | ||||||
| VAL | C:373 | C:373 | 0.0 | 0.0 | E | -122.7 | 128.2 | 0.0 | 0.0 | 0.0 |
HOH |
7.952 |
N |
O |
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| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | VAL | E:373 | A:373 | 0.0 | 0.0 | E | -120.6 | 126.7 | 0.0 | 0.0 | 0.0 | ||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | VAL | E:373 | A:373 | 0.0 | 0.0 | E | -120.6 | 126.7 | 0.0 | 0.0 | 0.0 | ||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -125.3 | 129.1 | 0.0 | 0.0 | 0.0 |
HOH |
6.967 |
N |
O |
||
| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -122.3 | 127.2 | 0.0 | 0.0 | 0.0 | ||||||
| VAL | E:373 | E:373 | 0.0 | 0.0 | E | -121.8 | 127.3 | 0.0 | 0.0 | 0.0 | |||||||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -128.7 | 118.3 | 0.0 | 0.0 | 0.0 |
HOH |
9.415 |
HG11 |
O |
||
| VAL | C:373 | C:373 | 0.0 | 0.0 | E | -134.4 | 117.9 | NA | NA | NA | |||||||||||||
| VAL | E:373 | E:373 | 0.0 | 0.0 | E | -130.9 | 115.4 | NA | NA | NA | |||||||||||||
| VAL | G:373 | G:373 | 0.0 | 0.0 | E | -134.8 | 121.7 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | VAL | A:373 | A:373 | 0.0 | 0.0 | E | -135.3 | 139.5 | 0.0 | 0.0 | 0.0 |
HOH |
7.066 |
H |
O |
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| VAL | C:373 | C:373 | 0.0 | 0.0 | E | -117.6 | 146.4 | 0.0 | 0.0 | 0.0 |
HOH |
8.575 |
O |
O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | VAL | E:371 | A:373 | 0.0 | 0.0 | E | -120.6 | 126.7 | 0.0 | 0.0 | 0.0 | ||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | VAL | E:371 | A:373 | 0.0 | 0.0 | E | -90.6 | 114.7 | 0.0 | 0.0 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | VAL | A:403 | A:403 | 0.0 | 0.0 | E | -117.6 | 123.4 | |