Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187511565 . A C CCDS2292.1:NM_002210.4:c.1312Atg>Ctg_NP_002201.1:p.438M>L Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 MET A:408 A:408 17.0 0.092 E -136.1 150.2 17.0 0.092 0.0
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 MET A:408 A:408 20.0 0.108 E -140.7 152.1 20.0 0.108 0.0
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 MET A:408 A:408 21.0 0.114 E -142.6 153.7 21.0 0.114 0.0
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 MET A:408 A:408 20.0 0.108 E -151.9 155.2 20.0 0.108 0.0
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 MET A:408 A:408 17.0 0.092 E -152.8 142.9 17.0 0.092 0.0
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 MET A:408 A:408 18.0 0.097 E -147.2 146.4 18.0 0.097 0.0
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 MET A:408 A:408 38.0 NA E -149.7 152.3 38.0 NA NA
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 MET A:408 A:408 33.0 0.178 E -150.8 155.4 33.0 0.178 0.0
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 MET A:408 A:408 22.0 0.119 E -156.0 154.2 22.0 0.119 0.0 HOH
 6.666
 N
 O
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 MET A:408 A:408 20.0 0.108 E -146.7 164.1 20.0 0.108 0.0 HOH
 2.863
 N
 O
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 MET A:408 A:408 17.0 0.092 E -150.4 143.9 17.0 0.092 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 MET A:408 A:408 16.0 0.086 E -150.4 146.6 16.0 0.086 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 MET A:408 A:408 20.0 0.108 E -146.8 151.0 20.0 0.108 0.0
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 MET A:408 A:408 42.0 NA E -159.9 146.1 42.0 NA NA
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 MET A:408 A:408 44.0 NA E -159.7 146.6 44.0 NA NA
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 MET A:408 A:408 41.0 NA E -157.8 144.3 41.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 MET A:408 A:408 21.0 0.114 E -157.0 150.7 21.0 0.114 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 MET A:408 A:408 21.0 0.114 E -168.4 151.4 21.0 0.114 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 MET A:408 A:408 20.0 0.108 E -139.7 157.1 20.0 0.108 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 MET A:408 A:408 20.0 0.108 -176.5 133.2 20.0 0.108 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 MET A:408 A:408 20.0 0.108 E -145.7 155.2 20.0 0.108 0.0
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 MET A:408 A:408 16.0 0.086 E -142.7 162.3 16.0 0.086 0.0
4um8 1 P06756 99.66 0.0 X-RAY
 2014-11-12 MET A:408 A:408 13.0 0.07 E -148.0 162.6 13.0 0.07 0.0 HOH
 4.759
 O
 O
MET C:408 C:408 18.0 0.097 E -148.3 163.0 NA NA NA
4um9 1 P06756 99.66 0.0 X-RAY
 2014-11-12 MET A:408 A:408 14.0 0.076 E -159.8 160.6 NA NA NA
MET C:408 C:408 19.0 0.103 E -159.9 161.0 19.0 0.103 0.0 HOH
 5.908
 O
 O
5ner 5 P06756 99.83 0.0 EM
 2017-06-21 MET E:408 A:408 19.0 0.103 E -157.4 156.3 19.0 0.103 0.0
5net 5 P06756 99.83 0.0 EM
 2017-06-21 MET E:408 A:408 20.0 0.108 E -157.4 156.3 20.0 0.108 0.0
5ffg 1 P06756 99.5 0.0 X-RAY
 2017-01-25 MET A:409 A:409 18.0 0.097 E -163.2 157.0 18.0 0.097 0.0 HOH
 3.175
 N
 O
5ffo 1 P06756 99.5 0.0 X-RAY
 2017-01-25 MET A:409 A:409 13.0 0.07 E -161.0 160.1 13.0 0.07 0.0
MET E:409 E:409 13.0 0.07 E -161.8 159.7 13.0 0.07 0.0
6om1 1 P06756 99.33 0.0 X-RAY
 2019-12-11 MET A:409 A:409 20.0 0.108 E -174.7 147.5 20.0 0.108 0.0 HOH
 2.984
 O
 O
MET C:409 C:409 19.0 0.103 E -165.0 155.1 NA NA NA
MET E:409 E:409 16.0 0.086 E -169.5 156.3 NA NA NA
MET G:409 G:409 22.0 0.119 E -174.9 150.8 NA NA NA
6om2 1 P06756 99.33 0.0 X-RAY
 2019-12-11 MET A:409 A:409 19.0 0.103 E -179.4 161.1 19.0 0.103 0.0
MET C:409 C:409 17.0 0.092 E -164.4 154.2 17.0 0.092 0.0 HOH
 3.834
 H
 O
5nem 5 P06756 99.16 0.0 EM
 2017-06-21 MET E:406 A:408 19.0 0.103 E -157.4 156.3 19.0 0.103 0.0
5neu 5 P06756 99.16 0.0 EM
 2017-06-21 MET E:406 A:408 13.0 0.07 -159.6 149.5 13.0 0.07 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 MET A:438 A:438 16.0 0.086 E -148.2 153.0