Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187511584 | . | T | A | CCDS2292.1:NM_002210.4:c.1331aTa>aAa_NP_002201.1:p.444I>K | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ILE | A:414 | A:414 | 6.0 | 0.034 | S | -87.5 | -40.7 | 6.0 | 0.034 | 0.0 |
CA |
4.403 |
N |
CA |
||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ILE | A:414 | A:414 | 6.0 | 0.034 | S | -89.7 | -40.0 | 6.0 | 0.034 | 0.0 |
CA |
4.459 |
N |
CA |
||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ILE | A:414 | A:414 | 3.0 | 0.017 | S | -92.0 | -39.5 | 3.0 | 0.017 | 0.0 |
CA |
4.346 |
N |
CA |
||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | ILE | A:414 | A:414 | 7.0 | 0.04 | -70.2 | -21.6 | 7.0 | 0.04 | 0.0 |
CA |
4.435 |
N |
CA |
|||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ILE | A:414 | A:414 | 5.0 | 0.029 | T | -74.1 | -30.4 | 5.0 | 0.029 | 0.0 |
MN |
4.604 |
N |
MN |
||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ILE | A:414 | A:414 | 7.0 | 0.04 | T | -75.2 | -30.3 | 7.0 | 0.04 | 0.0 |
MN |
4.481 |
N |
MN |
||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | ILE | A:414 | A:414 | 64.0 | NA | -64.1 | -44.7 | 64.0 | NA | NA | |||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | ILE | A:414 | A:414 | 6.0 | NA | -82.9 | -24.1 | 6.0 | NA | NA |
MN |
4.444 |
N |
MN |
|||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ILE | A:414 | A:414 | 2.0 | 0.011 | S | -84.1 | -36.7 | 2.0 | 0.011 | 0.0 |
CA |
4.177 |
N |
CA |
||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ILE | A:414 | A:414 | 8.0 | 0.046 | T | -82.1 | -20.1 | 8.0 | 0.046 | 0.0 |
CA HOH |
4.068 5.900 |
N N |
CA O |
||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ILE | A:414 | A:414 | 7.0 | 0.04 | S | -84.3 | -33.1 | 7.0 | 0.04 | 0.0 |
MN |
4.210 |
N |
MN |
||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ILE | A:414 | A:414 | 6.0 | 0.034 | S | -90.5 | -15.7 | 6.0 | 0.034 | 0.0 |
MN |
4.496 |
N |
MN |
||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ILE | A:414 | A:414 | 10.0 | 0.057 | S | -87.5 | -13.4 | 10.0 | 0.057 | 0.0 |
MN |
4.430 |
N |
MN |
||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ILE | A:414 | A:414 | 83.0 | NA | -79.5 | -40.6 | 83.0 | NA | NA | |||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ILE | A:414 | A:414 | 83.0 | NA | -80.2 | -39.2 | 83.0 | NA | NA | |||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ILE | A:414 | A:414 | 80.0 | NA | -69.4 | -46.2 | 80.0 | NA | NA | |||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | ILE | A:414 | A:414 | 6.0 | 0.034 | -70.2 | -35.2 | 6.0 | 0.034 | 0.0 |
CA |
5.063 |
N |
CA |
|||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | ILE | A:414 | A:414 | 4.0 | 0.023 | -64.5 | 8.5 | 4.0 | 0.023 | 0.0 |
MN |
4.371 |
N |
MN |
|||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | ILE | A:414 | A:414 | 7.0 | 0.04 | -49.0 | -34.0 | 7.0 | 0.04 | 0.0 |
MN |
4.782 |
N |
MN |
|||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | ILE | A:414 | A:414 | 4.0 | 0.023 | -55.7 | 15.3 | 4.0 | 0.023 | 0.0 |
CA |
4.674 |
N |
CA |
|||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | ILE | A:414 | A:414 | 8.0 | 0.046 | S | -69.1 | -33.7 | 8.0 | 0.046 | 0.0 |
MN |
4.457 |
N |
MN |
||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | ILE | A:414 | A:414 | 10.0 | 0.057 | S | -74.0 | -27.9 | 10.0 | 0.057 | 0.0 |
MN |
4.440 |
N |
MN |
||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ILE | A:414 | A:414 | 4.0 | 0.023 | S | -87.8 | -27.5 | 4.0 | 0.023 | 0.0 |
SO4 CA HOH |
9.944 4.652 6.083 |
N N CD1 |
O3 CA O |
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| ILE | C:414 | C:414 | 2.0 | 0.011 | S | -90.5 | -26.1 | NA | NA | NA | |||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ILE | A:414 | A:414 | 5.0 | 0.029 | T | -79.8 | -17.3 | NA | NA | NA | ||||||
| ILE | C:414 | C:414 | 2.0 | 0.011 | T | -80.9 | -17.7 | 2.0 | 0.011 | 0.0 |
CA HOH |
5.148 5.959 |
N CG2 |
CA O |
|||||||||
| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ILE | E:414 | A:414 | 2.0 | 0.011 | S | -82.8 | -15.4 | 2.0 | 0.011 | 0.0 |
CA |
5.188 |
N |
CA |
||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ILE | E:414 | A:414 | 2.0 | 0.011 | S | -82.8 | -15.5 | 2.0 | 0.011 | 0.0 |
CA |
5.189 |
N |
CA |
||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ILE | A:415 | A:415 | 8.0 | 0.046 | T | -79.8 | -20.3 | 8.0 | 0.046 | 0.0 |
CA HOH |
4.386 5.576 |
N CG2 |
CA O |
||
| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ILE | A:415 | A:415 | 8.0 | 0.046 | T | -78.2 | -17.5 | 8.0 | 0.046 | 0.0 |
CA |
4.964 |
N |
CA |
||
| ILE | E:415 | E:415 | 6.0 | 0.034 | T | -79.7 | -19.2 | 6.0 | 0.034 | 0.0 |
CA |
4.487 |
N |
CA |
|||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ILE | A:415 | A:415 | 4.0 | 0.023 | S | -75.5 | -34.2 | 4.0 | 0.023 | 0.0 |
CA HOH |
3.943 5.180 |
H HG22 |
CA O |
||
| ILE | C:415 | C:415 | 9.0 | 0.051 | T | -73.6 | -28.5 | NA | NA | NA | |||||||||||||
| ILE | E:415 | E:415 | 6.0 | 0.034 | T | -71.2 | -33.8 | NA | NA | NA | |||||||||||||
| ILE | G:415 | G:415 | 6.0 | 0.034 | S | -75.9 | -39.0 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ILE | A:415 | A:415 | 6.0 | 0.034 | S | -85.5 | -38.4 | 6.0 | 0.034 | 0.0 |
CA HOH |
3.883 5.083 |
H O |
CA O |
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| ILE | C:415 | C:415 | 5.0 | 0.029 | T | -75.0 | -33.7 | 5.0 | 0.029 | 0.0 |
CA HOH |
3.970 5.230 |
H N |
CA O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ILE | E:412 | A:414 | 2.0 | 0.011 | S | -82.8 | -15.5 | 2.0 | 0.011 | 0.0 |
CA |
5.189 |
N |
CA |
||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ILE | E:412 | A:414 | 0.0 | 0.0 | -128.1 | -35.8 | 0.0 | 0.0 | 0.0 | |||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | ILE | A:444 | A:444 | 3.0 | 0.017 | S | -80.3 | -26.8 | |