Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187516732 | . | A | C | CCDS2292.1:NM_002210.4:c.1421aAt>aCt_NP_002201.1:p.474N>T | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASN | A:444 | A:444 | 64.0 | NA | E | -103.1 | 102.0 | 64.0 | NA | NA | ||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASN | A:444 | A:444 | 93.0 | 0.581 | E | -97.4 | 100.3 | 93.0 | 0.581 | 0.0 | ||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASN | A:444 | A:444 | 97.0 | 0.606 | E | -93.3 | 101.1 | 97.0 | 0.606 | 0.0 | ||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | ASN | A:444 | A:444 | 73.0 | 0.456 | E | -120.7 | 103.1 | 73.0 | 0.456 | 0.0 | ||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASN | A:444 | A:444 | 86.0 | 0.537 | E | -110.5 | 128.4 | 86.0 | 0.537 | 0.0 | ||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASN | A:444 | A:444 | 87.0 | 0.544 | E | -110.8 | 130.2 | 87.0 | 0.544 | 0.0 |
NAG |
8.209 |
ND2 |
C8 |
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| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | ASN | A:444 | A:444 | 67.0 | NA | E | -94.9 | 110.4 | 67.0 | NA | NA | ||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | ASN | A:444 | A:444 | 117.0 | 0.731 | E | -120.2 | 104.4 | 117.0 | 0.731 | 0.0 | ||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASN | A:444 | A:444 | 100.0 | 0.625 | E | -119.8 | 128.0 | 100.0 | 0.625 | 0.0 | ||||||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASN | A:444 | A:444 | 83.0 | 0.519 | E | -114.4 | 125.7 | 83.0 | 0.519 | 0.0 |
NAG |
9.308 |
ND2 |
O6 |
||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASN | A:444 | A:444 | 90.0 | 0.562 | E | -105.5 | 115.9 | 90.0 | 0.562 | 0.0 |
NAG |
7.154 |
ND2 |
C8 |
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| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASN | A:444 | A:444 | 71.0 | 0.444 | E | -114.0 | 108.1 | 71.0 | 0.444 | 0.0 | ||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASN | A:444 | A:444 | 72.0 | 0.45 | E | -125.6 | 134.9 | 72.0 | 0.45 | 0.0 | ||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASN | A:444 | A:444 | 65.0 | NA | E | -95.5 | 110.3 | 65.0 | NA | NA | ||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASN | A:444 | A:444 | 67.0 | NA | E | -95.5 | 110.4 | 67.0 | NA | NA | ||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASN | A:444 | A:444 | 66.0 | NA | E | -94.5 | 109.8 | 66.0 | NA | NA | ||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | ASN | A:444 | A:444 | 81.0 | 0.506 | E | -92.3 | 143.0 | 81.0 | 0.506 | 0.0 | ||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | ASN | A:444 | A:444 | 81.0 | 0.506 | E | -102.9 | 132.1 | 81.0 | 0.506 | 0.0 | ||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | ASN | A:444 | A:444 | 87.0 | 0.544 | E | -122.1 | 118.8 | 87.0 | 0.544 | 0.0 | ||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | ASN | A:444 | A:444 | 76.0 | 0.475 | E | -123.4 | 144.1 | 76.0 | 0.475 | 0.0 | ||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | ASN | A:444 | A:444 | 76.0 | 0.475 | E | -122.4 | 138.1 | 76.0 | 0.475 | 0.0 | ||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | ASN | A:444 | A:444 | 75.0 | 0.469 | E | -129.1 | 140.1 | 75.0 | 0.469 | 0.0 | ||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ASN | A:444 | A:444 | 86.0 | 0.537 | -101.2 | 92.5 | 86.0 | 0.537 | 0.0 | |||||||
| ASN | C:444 | C:444 | 100.0 | 0.625 | -98.4 | 91.2 | NA | NA | NA | ||||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ASN | A:444 | A:444 | 95.0 | 0.594 | E | -110.0 | 101.0 | NA | NA | NA | ||||||
| ASN | C:444 | C:444 | 92.0 | 0.575 | E | -110.0 | 100.7 | 92.0 | 0.575 | 0.0 | |||||||||||||
| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ASN | E:444 | A:444 | 91.0 | 0.569 | -92.8 | 84.2 | 91.0 | 0.569 | 0.0 | |||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ASN | E:444 | A:444 | 92.0 | 0.575 | -92.7 | 84.1 | 92.0 | 0.575 | 0.0 | |||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ASN | A:445 | A:445 | 110.0 | 0.688 | E | -115.1 | 102.6 | 110.0 | 0.688 | 0.0 |
HOH |
2.941 |
O |
O |
||
| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ASN | A:445 | A:445 | 90.0 | 0.562 | E | -115.3 | 105.1 | 90.0 | 0.562 | 0.0 | ||||||
| ASN | E:445 | E:445 | 93.0 | 0.581 | E | -115.1 | 104.7 | 93.0 | 0.581 | 0.0 | |||||||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ASN | A:445 | A:445 | 74.0 | 0.463 | E | -108.7 | 120.4 | 74.0 | 0.463 | 0.0 |
HOH |
6.743 |
HD22 |
O |
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| ASN | C:445 | C:445 | 98.0 | 0.613 | E | -122.7 | 118.2 | NA | NA | NA | |||||||||||||
| ASN | E:445 | E:445 | 94.0 | 0.588 | E | -117.7 | 114.0 | NA | NA | NA | |||||||||||||
| ASN | G:445 | G:445 | 81.0 | 0.506 | E | -125.7 | 118.9 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ASN | A:445 | A:445 | 85.0 | 0.531 | E | -102.7 | 108.8 | 85.0 | 0.531 | 0.0 |
HOH |
3.823 |
HA |
O |
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| ASN | C:445 | C:445 | 113.0 | 0.706 | E | -110.3 | 122.4 | 113.0 | 0.706 | 0.0 |
HOH |
3.246 |
HB3 |
O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ASN | E:442 | A:444 | 92.0 | 0.575 | -92.7 | 84.2 | 92.0 | 0.575 | 0.0 | |||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ASN | E:442 | A:444 | 68.0 | 0.425 | E | -125.2 | 110.4 | 68.0 | 0.425 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | ASN | A:474 | A:474 | 89.0 | 0.556 | E | -97.6 | 108.2 | |