Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187521091 . G A CCDS2292.1:NM_002210.4:c.1682gGa>gAa_NP_002201.1:p.561G>E Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 GLY A:531 A:531 50.0 0.667 S -96.7 -150.2 50.0 0.667 0.0
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 GLY A:531 A:531 22.0 0.293 S -98.2 -152.3 22.0 0.293 0.0
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 GLY A:531 A:531 26.0 0.347 S -98.1 -151.2 26.0 0.347 0.0
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 GLY A:531 A:531 45.0 0.6 S 107.7 -46.2 45.0 0.6 0.0
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 GLY A:531 A:531 38.0 0.507 S -89.4 -112.3 38.0 0.507 0.0
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 GLY A:531 A:531 39.0 0.52 S 95.3 -3.7 39.0 0.52 0.0
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 GLY A:531 A:531 90.0 1.0 S 85.0 -4.0 90.0 1.0 0.0
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 GLY A:531 A:531 42.0 0.56 -111.6 -156.1 42.0 0.56 0.0
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 GLY A:531 A:531 71.0 0.947 S -89.8 35.1 71.0 0.947 0.0
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 GLY A:531 A:531 65.0 0.867 S -117.3 13.5 65.0 0.867 0.0
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 GLY A:531 A:531 63.0 0.84 T 73.5 8.6 63.0 0.84 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 GLY A:531 A:531 28.0 0.373 S 145.8 -163.6 28.0 0.373 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 GLY A:531 A:531 40.0 0.533 S 61.0 -156.8 40.0 0.533 0.0
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 GLY A:531 A:531 63.0 0.84 T 93.5 -11.5 63.0 0.84 0.0
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 GLY A:531 A:531 64.0 0.853 T 93.6 -11.7 64.0 0.853 0.0
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 GLY A:531 A:531 63.0 0.84 T 94.7 -14.2 63.0 0.84 0.0
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 GLY A:531 A:531 74.0 0.987 T -107.9 48.4 74.0 0.987 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 GLY A:531 A:531 61.0 0.813 S -121.7 -18.7 61.0 0.813 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 GLY A:531 A:531 61.0 0.813 S -147.9 3.4 61.0 0.813 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 GLY A:531 A:531 46.0 0.613 T 118.4 -31.1 46.0 0.613 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 GLY A:531 A:531 32.0 0.427 S 50.7 -133.0 32.0 0.427 0.0
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 GLY A:531 A:531 34.0 0.453 S 61.6 -143.0 34.0 0.453 0.0
4um8 1 P06756 99.66 0.0 X-RAY
 2014-11-12 GLY A:531 A:531 24.0 0.32 S -80.5 169.8 24.0 0.32 0.0
GLY C:531 C:531 22.0 0.293 S -78.7 171.8 NA NA NA
4um9 1 P06756 99.66 0.0 X-RAY
 2014-11-12 GLY A:531 A:531 27.0 0.36 S -72.8 179.2 NA NA NA
GLY C:531 C:531 21.0 0.28 S -73.5 178.7 21.0 0.28 0.0 SO4
 3.344
 CA
 O2
5ner 5 P06756 99.83 0.0 EM
 2017-06-21 GLY E:531 A:531 21.0 0.28 S -75.0 178.1 21.0 0.28 0.0
5net 5 P06756 99.83 0.0 EM
 2017-06-21 GLY E:531 A:531 21.0 0.28 S -75.0 178.1 21.0 0.28 0.0
5ffg 1 P06756 99.5 0.0 X-RAY
 2017-01-25 GLY A:532 A:532 30.0 0.4 S -75.5 -177.3 30.0 0.4 0.0 HOH
 2.620
 O
 O
5ffo 1 P06756 99.5 0.0 X-RAY
 2017-01-25 GLY A:532 A:532 50.0 0.667 S -73.1 -80.1 42.0 0.56 0.107 G:P01137:0.107
GLY E:532 E:532 46.0 0.613 S -72.1 -79.4 46.0 0.613 0.0
6om1 1 P06756 99.33 0.0 X-RAY
 2019-12-11 GLY A:532 A:532 26.0 0.347 S -88.1 175.3 26.0 0.347 0.0 HOH
 6.024
 O
 O
GLY C:532 C:532 26.0 0.347 S -98.5 170.9 NA NA NA
GLY E:532 E:532 22.0 0.293 S -111.6 -179.6 NA NA NA
GLY G:532 G:532 32.0 0.427 S -68.2 177.7 NA NA NA
6om2 1 P06756 99.33 0.0 X-RAY
 2019-12-11 GLY A:532 A:532 22.0 0.293 -80.6 -174.9 22.0 0.293 0.0 HOH
 2.589
 H
 O
GLY C:532 C:532 22.0 0.293 S -91.4 -176.5 22.0 0.293 0.0 HOH
 3.154
 HA3
 O
5nem 5 P06756 99.16 0.0 EM
 2017-06-21 GLY E:527 A:531 22.0 0.293 S -75.0 178.1 22.0 0.293 0.0
5neu 5 P06756 99.16 0.0 EM
 2017-06-21 GLY E:527 A:531 44.0 0.587 S -82.5 -132.8 44.0 0.587 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 GLY A:561 A:561 60.0 0.8 S -70.6 -14.2