Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187523864 | . | A | C | CCDS2292.1:NM_002210.4:c.1819Att>Ctt_NP_002201.1:p.607I>L | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ILE | A:577 | A:577 | 15.0 | 0.086 | E | -121.0 | 141.3 | 15.0 | 0.086 | 0.0 | ||||||
6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ILE | A:577 | A:577 | 13.0 | 0.074 | E | -124.3 | 144.1 | 13.0 | 0.074 | 0.0 | ||||||
6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ILE | A:577 | A:577 | 12.0 | 0.069 | E | -125.6 | 144.2 | 12.0 | 0.069 | 0.0 | ||||||
3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | ILE | A:577 | A:577 | 36.0 | 0.206 | E | -119.5 | 152.1 | 36.0 | 0.206 | 0.0 | ||||||
6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ILE | A:577 | A:577 | 38.0 | 0.217 | E | -147.6 | 148.3 | 38.0 | 0.217 | 0.0 | ||||||
6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ILE | A:577 | A:577 | 38.0 | 0.217 | E | -149.1 | 141.5 | 38.0 | 0.217 | 0.0 | ||||||
6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | ILE | A:577 | A:577 | 44.0 | NA | E | -126.7 | 165.7 | 44.0 | NA | NA | ||||||
4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | ILE | A:577 | A:577 | 42.0 | 0.24 | E | -121.7 | 152.0 | 42.0 | 0.24 | 0.0 | ||||||
4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ILE | A:577 | A:577 | 35.0 | 0.2 | E | -152.0 | 143.2 | 35.0 | 0.2 | 0.0 |
HOH |
3.026 |
CD1 |
O |
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4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ILE | A:577 | A:577 | 42.0 | 0.24 | E | -154.9 | 147.8 | 42.0 | 0.24 | 0.0 | ||||||
4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ILE | A:577 | A:577 | 39.0 | 0.223 | -110.8 | 152.6 | 39.0 | 0.223 | 0.0 | |||||||
4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ILE | A:577 | A:577 | 40.0 | 0.229 | E | -109.8 | 148.0 | 40.0 | 0.229 | 0.0 | ||||||
4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ILE | A:577 | A:577 | 39.0 | 0.223 | E | -124.3 | 139.2 | 39.0 | 0.223 | 0.0 | ||||||
6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ILE | A:577 | A:577 | 38.0 | NA | E | -131.0 | 151.0 | 38.0 | NA | NA | ||||||
6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ILE | A:577 | A:577 | 42.0 | NA | E | -129.1 | 152.1 | 42.0 | NA | NA | ||||||
6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ILE | A:577 | A:577 | 44.0 | NA | E | -137.1 | 152.2 | 44.0 | NA | NA | ||||||
1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | ILE | A:577 | A:577 | 29.0 | 0.166 | E | -146.4 | 134.2 | 29.0 | 0.166 | 0.0 | ||||||
1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | ILE | A:577 | A:577 | 30.0 | 0.171 | E | -156.5 | 150.3 | 30.0 | 0.171 | 0.0 | ||||||
1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | ILE | A:577 | A:577 | 43.0 | 0.246 | E | -152.4 | 144.4 | 43.0 | 0.246 | 0.0 | ||||||
1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | ILE | A:577 | A:577 | 51.0 | 0.291 | E | -156.5 | 167.6 | 51.0 | 0.291 | 0.0 | ||||||
6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | ILE | A:577 | A:577 | 47.0 | 0.269 | E | -152.8 | 137.5 | 47.0 | 0.269 | 0.0 | ||||||
6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | ILE | A:577 | A:577 | 42.0 | 0.24 | E | -144.3 | 136.9 | 42.0 | 0.24 | 0.0 | ||||||
4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ILE | A:577 | A:577 | 26.0 | 0.149 | E | -143.5 | 145.7 | 26.0 | 0.149 | 0.0 | ||||||
ILE | C:577 | C:577 | 30.0 | 0.171 | E | -145.0 | 147.4 | NA | NA | NA | |||||||||||||
4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ILE | A:577 | A:577 | 27.0 | 0.154 | E | -153.6 | 146.0 | NA | NA | NA | ||||||
ILE | C:577 | C:577 | 26.0 | 0.149 | E | -153.8 | 146.9 | 26.0 | 0.149 | 0.0 | |||||||||||||
5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ILE | E:577 | A:577 | 26.0 | 0.149 | E | -139.1 | 155.6 | 26.0 | 0.149 | 0.0 | ||||||
5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ILE | E:577 | A:577 | 27.0 | 0.154 | E | -139.1 | 155.5 | 27.0 | 0.154 | 0.0 | ||||||
5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ILE | A:578 | A:578 | 22.0 | 0.126 | E | -155.4 | 148.0 | 22.0 | 0.126 | 0.0 |
HOH |
6.953 |
O |
O |
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5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ILE | A:578 | A:578 | 33.0 | 0.189 | E | -152.8 | 147.1 | 33.0 | 0.189 | 0.0 | ||||||
ILE | E:578 | E:578 | 37.0 | 0.211 | E | -152.6 | 146.8 | 37.0 | 0.211 | 0.0 | |||||||||||||
6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ILE | A:578 | A:578 | 23.0 | 0.131 | E | -135.7 | 157.3 | 23.0 | 0.131 | 0.0 |
HOH |
2.670 |
HG13 |
O |
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ILE | C:578 | C:578 | 23.0 | 0.131 | E | -142.6 | 142.2 | NA | NA | NA | |||||||||||||
ILE | E:578 | E:578 | 30.0 | 0.171 | E | -141.0 | 142.4 | NA | NA | NA | |||||||||||||
ILE | G:578 | G:578 | 25.0 | 0.143 | E | -129.6 | 144.8 | NA | NA | NA | |||||||||||||
6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ILE | A:578 | A:578 | 25.0 | 0.143 | E | -136.1 | 154.3 | 25.0 | 0.143 | 0.0 |
HOH |
6.374 |
HB |
O |
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ILE | C:578 | C:578 | 28.0 | 0.16 | E | -133.9 | 138.5 | 28.0 | 0.16 | 0.0 |
HOH |
7.732 |
O |
O |
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5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ILE | E:573 | A:577 | 27.0 | 0.154 | E | -139.1 | 155.5 | 27.0 | 0.154 | 0.0 | ||||||
5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ILE | E:573 | A:577 | 38.0 | 0.217 | E | -132.3 | 157.6 | 38.0 | 0.217 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | ILE | A:607 | A:607 | 11.0 | 0.063 | E | -134.2 | 147.9 |