Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187523864 . A C CCDS2292.1:NM_002210.4:c.1819Att>Ctt_NP_002201.1:p.607I>L Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
2020-02-05 ILE A:577 A:577 15.0 0.086 E -121.0 141.3 15.0 0.086 0.0
6ujb 1 P06756 99.9 0.0 EM
2020-02-05 ILE A:577 A:577 13.0 0.074 E -124.3 144.1 13.0 0.074 0.0
6ujc 1 P06756 99.9 0.0 EM
2020-02-05 ILE A:577 A:577 12.0 0.069 E -125.6 144.2 12.0 0.069 0.0
3ije 1 P06756 99.9 0.0 X-RAY
2009-09-29 ILE A:577 A:577 36.0 0.206 E -119.5 152.1 36.0 0.206 0.0
6msl 1 P06756 99.9 0.0 X-RAY
2019-10-23 ILE A:577 A:577 38.0 0.217 E -147.6 148.3 38.0 0.217 0.0
6msu 1 P06756 99.9 0.0 X-RAY
2019-10-23 ILE A:577 A:577 38.0 0.217 E -149.1 141.5 38.0 0.217 0.0
6djp 1 P06756 99.9 0.0 EM
2018-07-25 ILE A:577 A:577 44.0 NA E -126.7 165.7 44.0 NA NA
4o02 1 P06756 99.9 0.0 X-RAY
2014-04-02 ILE A:577 A:577 42.0 0.24 E -121.7 152.0 42.0 0.24 0.0
4g1e 1 P06756 99.9 0.0 X-RAY
2012-12-12 ILE A:577 A:577 35.0 0.2 E -152.0 143.2 35.0 0.2 0.0 HOH
3.026
CD1
O
4g1m 1 P06756 99.9 0.0 X-RAY
2012-12-12 ILE A:577 A:577 42.0 0.24 E -154.9 147.8 42.0 0.24 0.0
4mmx 1 P06756 99.9 0.0 X-RAY
2014-03-26 ILE A:577 A:577 39.0 0.223 -110.8 152.6 39.0 0.223 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
2014-03-26 ILE A:577 A:577 40.0 0.229 E -109.8 148.0 40.0 0.229 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
2014-03-26 ILE A:577 A:577 39.0 0.223 E -124.3 139.2 39.0 0.223 0.0
6avq 1 P06756 100.0 0.0 EM
2017-11-01 ILE A:577 A:577 38.0 NA E -131.0 151.0 38.0 NA NA
6avr 1 P06756 100.0 0.0 EM
2017-11-01 ILE A:577 A:577 42.0 NA E -129.1 152.1 42.0 NA NA
6avu 1 P06756 100.0 0.0 EM
2017-11-01 ILE A:577 A:577 44.0 NA E -137.1 152.2 44.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
2001-10-17 ILE A:577 A:577 29.0 0.166 E -146.4 134.2 29.0 0.166 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
2002-04-17 ILE A:577 A:577 30.0 0.171 E -156.5 150.3 30.0 0.171 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
2002-08-14 ILE A:577 A:577 43.0 0.246 E -152.4 144.4 43.0 0.246 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
2004-12-28 ILE A:577 A:577 51.0 0.291 E -156.5 167.6 51.0 0.291 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
2019-09-25 ILE A:577 A:577 47.0 0.269 E -152.8 137.5 47.0 0.269 0.0
6naj 1 P06756 99.9 0.0 X-RAY
2019-12-11 ILE A:577 A:577 42.0 0.24 E -144.3 136.9 42.0 0.24 0.0
4um8 1 P06756 99.66 0.0 X-RAY
2014-11-12 ILE A:577 A:577 26.0 0.149 E -143.5 145.7 26.0 0.149 0.0
ILE C:577 C:577 30.0 0.171 E -145.0 147.4 NA NA NA
4um9 1 P06756 99.66 0.0 X-RAY
2014-11-12 ILE A:577 A:577 27.0 0.154 E -153.6 146.0 NA NA NA
ILE C:577 C:577 26.0 0.149 E -153.8 146.9 26.0 0.149 0.0
5ner 5 P06756 99.83 0.0 EM
2017-06-21 ILE E:577 A:577 26.0 0.149 E -139.1 155.6 26.0 0.149 0.0
5net 5 P06756 99.83 0.0 EM
2017-06-21 ILE E:577 A:577 27.0 0.154 E -139.1 155.5 27.0 0.154 0.0
5ffg 1 P06756 99.5 0.0 X-RAY
2017-01-25 ILE A:578 A:578 22.0 0.126 E -155.4 148.0 22.0 0.126 0.0 HOH
6.953
O
O
5ffo 1 P06756 99.5 0.0 X-RAY
2017-01-25 ILE A:578 A:578 33.0 0.189 E -152.8 147.1 33.0 0.189 0.0
ILE E:578 E:578 37.0 0.211 E -152.6 146.8 37.0 0.211 0.0
6om1 1 P06756 99.33 0.0 X-RAY
2019-12-11 ILE A:578 A:578 23.0 0.131 E -135.7 157.3 23.0 0.131 0.0 HOH
2.670
HG13
O
ILE C:578 C:578 23.0 0.131 E -142.6 142.2 NA NA NA
ILE E:578 E:578 30.0 0.171 E -141.0 142.4 NA NA NA
ILE G:578 G:578 25.0 0.143 E -129.6 144.8 NA NA NA
6om2 1 P06756 99.33 0.0 X-RAY
2019-12-11 ILE A:578 A:578 25.0 0.143 E -136.1 154.3 25.0 0.143 0.0 HOH
6.374
HB
O
ILE C:578 C:578 28.0 0.16 E -133.9 138.5 28.0 0.16 0.0 HOH
7.732
O
O
5nem 5 P06756 99.16 0.0 EM
2017-06-21 ILE E:573 A:577 27.0 0.154 E -139.1 155.5 27.0 0.154 0.0
5neu 5 P06756 99.16 0.0 EM
2017-06-21 ILE E:573 A:577 38.0 0.217 E -132.3 157.6 38.0 0.217 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 ILE A:607 A:607 11.0 0.063 E -134.2 147.9