Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187529249 | . | G | A | CCDS2292.1:NM_002210.4:c.1954Gac>Aac_NP_002201.1:p.652D>N | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASP | A:622 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASP | A:622 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASP | A:622 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | ASP | A:622 | A:622 | 91.0 | 0.607 | -70.2 | 147.6 | 91.0 | 0.607 | 0.0 |
NAG NAG BMA |
7.847 4.913 5.534 |
OD2 O O |
C4 C6 C1 |
|||
6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASP | A:622 | A:622 | 93.0 | 0.62 | -98.4 | 103.4 | 93.0 | 0.62 | 0.0 |
NAG NAG BMA |
7.888 5.611 4.065 |
O O O |
O4 C3 O5 |
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6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASP | A:622 | A:622 | 91.0 | 0.607 | -107.7 | 94.7 | 91.0 | 0.607 | 0.0 |
NAG NAG BMA |
7.378 5.404 3.901 |
O O O |
O4 O5 O5 |
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6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | ASP | A:622 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | ASP | A:622 | A:622 | 100.0 | NA | S | 41.2 | 68.2 | 100.0 | NA | NA |
NAG |
7.336 |
CB |
O3 |
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4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASP | A:622 | A:622 | 80.0 | 0.533 | -96.3 | 114.8 | 55.0 | 0.367 | 0.166 |
B:P05106:0.167 |
NAG NAG BMA HOH |
7.059 5.587 6.551 2.314 |
O O O O |
O6 C3 O5 O |
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4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASP | A:622 | A:622 | 93.0 | 0.62 | E | -85.1 | 129.9 | 87.0 | 0.58 | 0.04 |
B:P05106:0.04 |
NAG NAG BMA |
6.689 4.603 4.456 |
OD2 O O |
O6 O4 O2 |
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4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASP | A:622 | A:622 | 91.0 | 0.607 | -104.9 | 129.3 | 91.0 | 0.607 | 0.0 |
NAG NAG BMA |
7.630 5.661 4.376 |
OD2 O O |
O3 C3 O5 |
|||
4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASP | A:622 | A:622 | 92.0 | 0.613 | -102.3 | 109.6 | 91.0 | 0.607 | 0.006 |
B:P05106:0.007 |
NAG NAG BMA |
7.662 5.503 4.544 |
OD2 O O |
O3 O5 O5 |
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4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASP | A:622 | A:622 | 101.0 | 0.673 | -69.2 | 160.2 | 101.0 | 0.673 | 0.0 |
NAG NAG BMA |
6.518 5.050 3.765 |
OD2 C O |
O3 C8 O5 |
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6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASP | A:622 | A:622 | 80.0 | NA | -94.4 | 95.5 | 80.0 | NA | NA | |||||||
6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASP | A:622 | A:622 | 80.0 | NA | -94.0 | 94.7 | 80.0 | NA | NA | |||||||
6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASP | A:622 | A:622 | 80.0 | NA | -90.9 | 104.3 | 80.0 | NA | NA | |||||||
1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | ASP | A:622 | A:622 | 98.0 | 0.653 | -64.9 | 100.3 | 98.0 | 0.653 | 0.0 |
NAG NDG |
5.409 3.961 |
OD2 O |
C8 C5 |
|||
1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | ASP | A:622 | A:622 | 98.0 | 0.653 | -95.7 | 102.0 | 98.0 | 0.653 | 0.0 |
NAG NDG |
6.268 3.274 |
OD1 O |
C8 O6 |
|||
1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | ASP | A:622 | A:622 | 89.0 | 0.593 | -82.1 | 116.3 | 89.0 | 0.593 | 0.0 |
NAG NDG |
6.540 3.976 |
OD1 OD1 |
C8 O6 |
|||
1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | ASP | A:622 | A:622 | 88.0 | 0.587 | -86.8 | 102.4 | 83.0 | 0.553 | 0.034 |
B:P05106:0.033 |
NAG NDG |
7.158 4.836 |
OD2 O |
C8 O4 |
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6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | ASP | A:622 | A:622 | 106.0 | 0.707 | -79.4 | 131.3 | 106.0 | 0.707 | 0.0 |
NAG NAG BMA |
6.406 5.086 4.665 |
OD1 OD1 O |
O3 C5 O5 |
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6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | ASP | A:622 | A:622 | 102.0 | 0.68 | -70.7 | 152.6 | 102.0 | 0.68 | 0.0 |
NAG NAG BMA |
6.482 5.249 3.974 |
OD1 OD1 O |
O3 C8 O5 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | ASP | A:652 | A:652 | 97.0 | 0.647 | -82.1 | 108.2 |