Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187533544 . C A CCDS2292.1:NM_002210.4:c.2489cCt>cAt_NP_002201.1:p.830P>H Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
2020-02-05 PRO A:800 NA:NA DO NA DO DO DO NA NA NA
6ujb 1 P06756 99.9 0.0 EM
2020-02-05 PRO A:800 NA:NA DO NA DO DO DO NA NA NA
6ujc 1 P06756 99.9 0.0 EM
2020-02-05 PRO A:800 NA:NA DO NA DO DO DO NA NA NA
3ije 1 P06756 99.9 0.0 X-RAY
2009-09-29 PRO A:800 A:800 1.0 0.007 E -74.0 96.5 1.0 0.007 0.0
6msl 1 P06756 99.9 0.0 X-RAY
2019-10-23 PRO A:800 A:800 1.0 0.007 E -80.8 88.2 1.0 0.007 0.0
6msu 1 P06756 99.9 0.0 X-RAY
2019-10-23 PRO A:800 A:800 0.0 0.0 E -75.4 88.9 0.0 0.0 0.0
6djp 1 P06756 99.9 0.0 EM
2018-07-25 PRO A:800 NA:NA DO NA DO DO DO NA NA NA
4o02 1 P06756 99.9 0.0 X-RAY
2014-04-02 PRO A:800 A:800 26.0 NA B -73.8 95.0 26.0 NA NA
4g1e 1 P06756 99.9 0.0 X-RAY
2012-12-12 PRO A:800 A:800 0.0 0.0 E -68.4 77.9 0.0 0.0 0.0 HOH
7.384
O
O
4g1m 1 P06756 99.9 0.0 X-RAY
2012-12-12 PRO A:800 A:800 1.0 0.007 E -70.6 89.0 1.0 0.007 0.0 HOH
8.568
O
O
4mmx 1 P06756 99.9 0.0 X-RAY
2014-03-26 PRO A:800 A:800 1.0 0.007 E -69.9 77.8 1.0 0.007 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
2014-03-26 PRO A:800 A:800 0.0 0.0 E -82.3 79.7 0.0 0.0 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
2014-03-26 PRO A:800 A:800 0.0 0.0 E -79.4 80.4 0.0 0.0 0.0
6avq 1 P06756 100.0 0.0 EM
2017-11-01 PRO A:800 A:800 15.0 NA E -64.7 135.0 15.0 NA NA
6avr 1 P06756 100.0 0.0 EM
2017-11-01 PRO A:800 A:800 16.0 NA E -64.2 134.9 16.0 NA NA
6avu 1 P06756 100.0 0.0 EM
2017-11-01 PRO A:800 A:800 18.0 NA E -64.0 135.0 18.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
2001-10-17 PRO A:800 A:800 0.0 0.0 E -71.0 -156.7 0.0 0.0 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
2002-04-17 PRO A:800 A:800 0.0 0.0 E -74.0 85.5 0.0 0.0 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
2002-08-14 PRO A:800 A:800 0.0 0.0 E -78.0 75.1 0.0 0.0 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
2004-12-28 PRO A:800 A:800 0.0 0.0 E -65.8 78.8 0.0 0.0 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
2019-09-25 PRO A:800 A:800 0.0 0.0 E -79.2 86.0 0.0 0.0 0.0
6naj 1 P06756 99.9 0.0 X-RAY
2019-12-11 PRO A:800 A:800 1.0 0.007 E -75.8 86.0 1.0 0.007 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 PRO A:830 A:830 0.0 0.0 E -75.0 92.2