Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187533553 . A C CCDS2292.1:NM_002210.4:c.2498tAt>tCt_NP_002201.1:p.833Y>S Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 TYR A:803 NA:NA DO NA DO DO DO NA NA NA
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 TYR A:803 NA:NA DO NA DO DO DO NA NA NA
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 TYR A:803 NA:NA DO NA DO DO DO NA NA NA
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 TYR A:803 A:803 63.0 0.274 B -113.9 131.6 63.0 0.274 0.0 NAG
 6.865
 O
 N2
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 TYR A:803 A:803 40.0 0.174 S -142.3 116.4 40.0 0.174 0.0
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 TYR A:803 A:803 58.0 0.252 S -143.6 122.0 58.0 0.252 0.0
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 TYR A:803 NA:NA DO NA DO DO DO NA NA NA
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 TYR A:803 A:803 89.0 NA S -75.9 -71.3 89.0 NA NA
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 TYR A:803 A:803 17.0 0.074 S -140.3 112.6 17.0 0.074 0.0 HOH
 8.504
 OH
 O
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 TYR A:803 A:803 55.0 0.239 S -131.0 104.7 55.0 0.239 0.0 NAG
 6.568
 O
 C8
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 TYR A:803 A:803 48.0 0.209 E -132.5 115.8 48.0 0.209 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 TYR A:803 A:803 49.0 0.213 E -127.2 113.0 49.0 0.213 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 TYR A:803 A:803 62.0 0.27 E -135.8 119.4 62.0 0.27 0.0 NAG
 7.997
 C
 C8
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 TYR A:803 A:803 43.0 NA E -89.1 118.9 43.0 NA NA
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 TYR A:803 A:803 44.0 NA E -88.9 119.2 44.0 NA NA
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 TYR A:803 A:803 44.0 NA E -90.0 119.9 44.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 TYR A:803 A:803 58.0 0.252 E -174.1 117.6 58.0 0.252 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 TYR A:803 A:803 61.0 0.265 E -128.1 108.7 61.0 0.265 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 TYR A:803 A:803 64.0 0.278 E -127.7 117.2 64.0 0.278 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 TYR A:803 A:803 45.0 0.196 S -105.6 -33.0 45.0 0.196 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 TYR A:803 A:803 72.0 0.313 S -142.9 105.6 72.0 0.313 0.0 NAG
 6.991
 C
 C8
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 TYR A:803 A:803 60.0 0.261 S -149.4 113.4 60.0 0.261 0.0 NAG
 7.456
 C
 C8

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 TYR A:833 A:833 52.0 0.226 E -131.1 122.7