Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187540618 . G A CCDS2292.1:NM_002210.4:c.2892aaG>aaA_NP_002201.1:p.964K>K Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 LYS A:934 NA:NA DO NA DO DO DO NA NA NA
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 LYS A:934 NA:NA DO NA DO DO DO NA NA NA
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 LYS A:934 NA:NA DO NA DO DO DO NA NA NA
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 LYS A:934 A:934 186.0 0.93 T -65.0 -11.1 186.0 0.93 0.0
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 LYS A:934 A:934 97.0 0.485 -92.5 177.2 97.0 0.485 0.0
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 LYS A:934 A:934 88.0 0.44 T -71.4 168.3 88.0 0.44 0.0
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 LYS A:934 NA:NA DO NA DO DO DO NA NA NA
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 LYS A:934 A:934 106.0 NA S -75.0 -42.0 106.0 NA NA
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 LYS A:934 A:934 117.0 0.585 S -87.1 -33.2 117.0 0.585 0.0 HOH
 7.014
 NZ
 O
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 LYS A:934 A:934 117.0 0.585 T -63.3 -31.5 117.0 0.585 0.0 NA
 9.068
 N
 NA
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 LYS A:934 A:934 86.0 0.43 -97.5 174.3 86.0 0.43 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 LYS A:934 A:934 91.0 0.455 T -97.6 145.3 91.0 0.455 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 LYS A:934 A:934 100.0 0.5 -46.4 146.8 100.0 0.5 0.0
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 LYS A:934 A:934 97.0 NA T -60.3 -30.6 97.0 NA NA
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 LYS A:934 A:934 97.0 NA T -60.9 -29.8 97.0 NA NA
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 LYS A:934 A:934 97.0 NA T -58.6 -32.2 97.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 LYS A:934 A:934 163.0 0.815 -127.4 -45.7 163.0 0.815 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 LYS A:934 A:934 126.0 0.63 T -100.0 144.0 126.0 0.63 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 LYS A:934 A:934 165.0 0.825 -116.8 -22.5 165.0 0.825 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 LYS A:934 A:934 161.0 0.805 59.9 -33.2 161.0 0.805 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 LYS A:934 A:934 107.0 0.535 -50.3 154.3 107.0 0.535 0.0
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 LYS A:934 A:934 103.0 0.515 -50.8 154.8 103.0 0.515 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 LYS A:964 A:964 124.0 0.62 T -57.7 -23.1