Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 87017465 . G A CCDS1992.1:NM_001145873.1:c.389cCg>cTg_NP_001139345.1:p.130P>L Homo sapiens CD8a molecule (CD8A), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1akj 4 P01732 100.0 4e-85 X-RAY
1997-09-17 PRO D:109 D:109 56.0 0.386 E -66.3 115.3 56.0 0.386 0.0 HOH
7.165
CD
O
PRO E:109 E:109 50.0 0.345 E -64.8 121.4 50.0 0.345 0.0 HOH
3.083
O
O
1cd8 1 P01732 100.0 1e-80 X-RAY
1994-01-31 PRO A:109 A:109 50.0 0.345 E -73.5 117.8 50.0 0.345 0.0 SO4
HOH
9.694
1.891
O
O
O1
H1
3qzw 4 P01732 100.0 1e-80 X-RAY
2011-06-29 PRO G:109 G:109 55.0 0.379 E -67.8 127.4 55.0 0.379 0.0 HOH
3.059
O
O
PRO H:109 H:109 46.0 0.317 E -64.9 112.1 46.0 0.317 0.0 HOH
5.339
CB
O
PRO I:109 I:109 54.0 0.372 E -58.3 103.3 NA NA NA
PRO J:109 J:109 48.0 0.331 E -68.6 119.4 NA NA NA
2q3a 1 ? 95.0 2e-80 X-RAY
2008-06-17 PRO A:109 A:109 57.0 0.393 E -68.5 128.8 57.0 0.393 0.0 HOH
2.773
O
O
PRO B:109 B:109 51.0 0.352 E -69.0 134.0 51.0 0.352 0.0 HOH
2.647
O
O
2hp4 1 P01732 98.25 3e-79 X-RAY
2007-02-06 PRO A:109 A:109 51.0 0.352 E -73.8 125.7 51.0 0.352 0.0 HOH
2.689
O
O
PRO B:109 B:109 52.0 0.359 E -73.7 126.8 52.0 0.359 0.0 HOH
2.669
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01732-f1 1 P01732 100.0 1e-173 PRO A:130 A:130 36.0 0.248 E -72.3 123.4