Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 87017666 | . | G | A | CCDS1992.1:NM_001145873.1:c.188gCc>gTc_NP_001139345.1:p.63A>V | Homo sapiens CD8a molecule (CD8A), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1akj | 4 | P01732 | 100.0 | 4e-85 |
X-RAY |
1997-09-17 | ALA | D:42 | D:42 | 110.0 | 0.957 | T | -56.7 | 120.2 | 100.0 | 0.87 | 0.087 |
E:P01732:0.087 |
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ALA | E:42 | E:42 | 105.0 | 0.913 | T | -59.6 | 156.6 | 85.0 | 0.739 | 0.174 |
D:P01732:0.174 |
HOH |
7.432 |
O |
O |
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1cd8 | 1 | P01732 | 100.0 | 1e-80 |
X-RAY |
1994-01-31 | ALA | A:42 | A:42 | 87.0 | 0.757 | S | -94.2 | 33.6 | 28.0 | 0.243 | 0.514 |
A:P01732:0.513 |
HOH |
3.939 |
O |
H2 |
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3qzw | 4 | P01732 | 100.0 | 1e-80 |
X-RAY |
2011-06-29 | ALA | G:42 | G:42 | 75.0 | 0.652 | S | 44.2 | -124.2 | 8.0 | 0.07 | 0.582 |
H:P01732:0.583 |
HOH |
4.792 |
N |
O |
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ALA | H:42 | H:42 | 77.0 | 0.67 | S | 37.5 | 36.0 | 1.0 | 0.009 | 0.661 |
G:P01732:0.661 |
HOH |
3.988 |
O |
O |
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ALA | I:42 | I:42 | 88.0 | 0.765 | S | -102.4 | 149.5 | NA | NA | NA | |||||||||||||
ALA | J:42 | J:42 | 107.0 | 0.93 | S | -49.2 | -50.0 | NA | NA | NA | |||||||||||||
2q3a | 1 | ? | 95.0 | 2e-80 |
X-RAY |
2008-06-17 | THR | A:42 | A:42 | 145.0 | 1.0 | T | -83.2 | 140.3 | 98.0 | 0.7 | 0.3 |
B:None:0.336 |
HOH |
3.182 |
CG2 |
O |
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THR | B:42 | B:42 | 141.0 | 1.0 | S | -100.0 | 153.2 | 74.0 | 0.529 | 0.471 |
A:None:0.479 |
HOH |
3.100 |
CG2 |
O |
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2hp4 | 1 | P01732 | 98.25 | 3e-79 |
X-RAY |
2007-02-06 | ALA | A:42 | A:42 | 85.0 | 0.739 | S | -164.1 | -163.5 | 58.0 | 0.504 | 0.235 |
B:P01732:0.235 |
HOH |
3.354 |
CA |
O |
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ALA | B:42 | B:42 | 78.0 | 0.678 | S | 158.6 | -167.9 | 56.0 | 0.487 | 0.191 |
A:P01732:0.191 |
HOH |
2.991 |
CB |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p01732-f1 | 1 | P01732 | 100.0 | 1e-173 | ALA | A:63 | A:63 | 123.0 | 1.0 | T | -61.7 | -24.1 |