Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 113588036 . T A CCDS2102.1:NM_000576.2:c.712Atc>Ttc_NP_000567.1:p.238I>F Homo sapiens interleukin 1 beta (IL1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5mvz 3 B5BUQ8 98.09 6e-111 X-RAY
 2017-02-15 ILE C:146 U:122 7.0 0.04 E -59.5 131.2 7.0 0.04 0.0 HOH
 2.989
 O
 O
ILE F:146 V:122 13.0 0.074 E -47.8 128.8 NA NA NA
7chy 3 P01584 100.0 4e-110 X-RAY
 2021-01-13 ILE C:126 I:238 3.0 0.017 E -54.2 125.0 3.0 0.017 0.0 HOH
 6.462
 O
 O
7chz 3 P01584 100.0 4e-110 X-RAY
 2021-01-13 ILE C:126 I:239 4.0 0.023 E -61.7 123.4 4.0 0.023 0.0 HOH
 2.594
 O
 O
1i1b 1 P01584 100.0 4e-110 X-RAY
 1990-01-15 ILE A:122 A:122 7.0 0.04 E -65.9 127.2 7.0 0.04 0.0 HOH
 2.697
 O
 O
1iob 1 P01584 100.0 4e-110 NMR
X-RAY
 1996-08-17 ILE A:122 A:122 9.0 0.051 E -66.0 132.4 9.0 0.051 0.0 HOH
 3.057
 O
 O
1itb 1 P01584 100.0 4e-110 X-RAY
 1998-02-04 ILE A:122 A:122 5.0 0.029 E -65.2 124.6 5.0 0.029 0.0 HOH
 2.274
 O
 H2
2i1b 1 P01584 100.0 4e-110 X-RAY
 1990-04-15 ILE A:122 A:122 4.0 0.023 E -67.5 124.7 4.0 0.023 0.0 HOH
 2.739
 O
 O
2nvh 1 P01584 100.0 4e-110 X-RAY
 2006-12-12 ILE A:122 A:122 5.0 0.029 E -61.0 129.4 5.0 0.029 0.0 HOH
 2.755
 O
 O
4i1b 1 P01584 100.0 4e-110 X-RAY
 1990-04-15 ILE A:122 A:122 6.0 0.034 E -55.4 118.4 6.0 0.034 0.0 HOH
 2.884
 O
 O
5bvp 2 P01584 100.0 4e-110 X-RAY
 2015-09-02 ILE B:122 I:122 5.0 0.029 E -62.7 123.1 5.0 0.029 0.0 HOH
 2.925
 O
 O
5i1b 1 P01584 100.0 4e-110 X-RAY
 1992-01-15 ILE A:122 A:122 4.0 0.023 E -68.9 130.2 4.0 0.023 0.0 HOH
 2.678
 O
 O
5r7w 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 5.0 0.029 E -56.0 128.2 5.0 0.029 0.0 HOH
 2.767
 O
 O
5r85 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -56.9 127.6 4.0 0.023 0.0 S7A
HOH
 7.271
2.740
 CG2
O
 F1
O
5r86 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -57.7 126.9 4.0 0.023 0.0 HOH
 2.731
 O
 O
5r87 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 3.0 0.017 E -58.0 130.0 3.0 0.017 0.0 HOH
 2.742
 O
 O
5r88 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 3.0 0.017 E -58.2 125.9 3.0 0.017 0.0 LWA
HOH
 7.564
2.718
 CG2
O
 C11
O
5r89 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -59.5 128.2 4.0 0.023 0.0 S7D
HOH
 8.355
2.696
 CG2
O
 C
O
5r8a 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -56.3 129.0 4.0 0.023 0.0 HOH
 2.711
 O
 O
5r8b 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 3.0 0.017 E -57.7 128.8 3.0 0.017 0.0 HOH
 2.692
 O
 O
5r8c 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -58.0 128.6 4.0 0.023 0.0 HOH
 2.720
 O
 O
5r8d 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -56.2 128.2 4.0 0.023 0.0 S7J
HOH
 6.635
2.737
 CG2
O
 F2
O
5r8e 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -57.0 125.9 4.0 0.023 0.0 S7S
HOH
 7.563
2.695
 CG2
O
 C
O
5r8f 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 5.0 0.029 E -55.8 128.0 5.0 0.029 0.0 HOH
 2.736
 O
 O
5r8g 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -55.7 127.8 4.0 0.023 0.0 HOH
 2.769
 O
 O
5r8h 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -56.3 126.1 4.0 0.023 0.0 HOH
 2.700
 O
 O
5r8i 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 3.0 0.017 E -56.6 129.3 3.0 0.017 0.0 A7N
HOH
 7.808
2.718
 CG2
O
 C1
O
5r8j 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 5.0 0.029 E -56.0 125.9 5.0 0.029 0.0 HOH
 2.755
 O
 O
5r8k 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -57.2 127.8 4.0 0.023 0.0 HOH
 2.741
 O
 O
5r8l 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -59.8 127.1 4.0 0.023 0.0 NY4
HOH
 7.523
2.677
 CG2
O
 N1
O
5r8m 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -55.7 127.5 4.0 0.023 0.0 S8G
HOH
 6.845
2.748
 CG2
O
 F1
O
5r8n 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -59.3 128.3 4.0 0.023 0.0 S8J
HOH
 7.639
2.714
 CG2
O
 C10
O
5r8o 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 3.0 0.017 E -56.8 127.9 3.0 0.017 0.0 S8P
HOH
 7.921
2.725
 CG2
O
 C8
O
5r8p 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -57.1 129.7 4.0 0.023 0.0 S8V
HOH
 8.364
2.716
 CG2
O
 C6
O
5r8q 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 ILE A:122 A:122 4.0 0.023 E -57.5 125.0 4.0 0.023 0.0 JGY
HOH
 7.576
2.738
 CG2
O
 C13
O
6y8i 1 P01584 100.0 4e-110 X-RAY
 2020-06-17 ILE A:122 A:122 4.0 0.023 E -58.2 129.5 4.0 0.023 0.0 HOH
 2.770
 O
 O
6y8m 1 P01584 100.0 4e-110 X-RAY
 2020-03-18 ILE A:122 A:122 4.0 0.023 E -56.6 125.6 4.0 0.023 0.0 HOH
 2.842
 O
 O
9ilb 1 P01584 100.0 4e-110 X-RAY
 1999-01-06 ILE A:122 A:122 6.0 0.034 E -68.5 128.1 6.0 0.034 0.0 HOH
 2.643
 O
 O
4g6j 1 P01584 100.0 6e-110 X-RAY
 2012-12-19 ILE A:123 A:122 8.0 0.046 E -62.7 122.1 8.0 0.046 0.0 HOH
 2.773
 O
 O
3o4o 1 P01584 100.0 8e-110 X-RAY
 2010-09-01 ILE A:127 A:122 9.0 0.051 E -57.7 124.7 9.0 0.051 0.0
4dep 1 P01584 100.0 8e-110 X-RAY
 2012-03-21 ILE A:127 A:122 7.0 0.04 E -65.2 111.5 7.0 0.04 0.0
ILE D:127 D:122 7.0 0.04 E -75.4 115.9 NA NA NA
1twm 1 P01584 99.35 9e-110 X-RAY
 2004-12-07 ILE A:122 A:122 9.0 0.051 E -68.6 120.2 9.0 0.051 0.0 HOH
 2.851
 O
 O
1twe 1 P01584 99.35 9e-110 X-RAY
 2004-12-07 ILE A:122 A:122 8.0 0.046 E -67.7 129.6 8.0 0.046 0.0 HOH
 2.796
 O
 O
1t4q 1 P01584 99.35 3e-109 X-RAY
 2004-12-07 ILE A:122 A:122 7.0 0.04 E -67.3 128.5 7.0 0.04 0.0 HOH
 2.825
 O
 O
1too 1 P01584 99.35 3e-109 X-RAY
 2004-12-07 ILE A:122 A:122 6.0 0.034 E -68.1 125.4 6.0 0.034 0.0 HOH
 2.878
 O
 O
1s0l 1 P01584 99.35 3e-109 X-RAY
 2004-03-30 ILE A:122 A:122 9.0 0.051 E -68.0 129.1 9.0 0.051 0.0 HOH
 2.876
 O
 O
21bi 1 P01584 99.35 4e-109 X-RAY
 1992-04-15 ILE A:122 A:122 6.0 0.034 E -57.6 120.7 6.0 0.034 0.0
41bi 1 P01584 99.35 4e-109 X-RAY
 1992-04-15 ILE A:122 A:122 7.0 0.04 E -58.0 123.4 7.0 0.04 0.0
31bi 1 P01584 99.35 6e-109 X-RAY
 1992-04-15 ILE A:122 A:122 8.0 0.046 E -51.8 118.9 8.0 0.046 0.0
1hib 1 P01584 99.35 7e-109 X-RAY
 1994-01-31 ILE A:122 A:122 2.0 0.011 E -67.6 124.7 2.0 0.011 0.0 HOH
 2.611
 O
 O
1tp0 1 P01584 98.04 2e-108 X-RAY
 2005-02-08 ILE A:122 A:122 9.0 0.051 E -63.8 119.7 9.0 0.051 0.0 HOH
 2.868
 O
 O
4g6m 1 P01584 100.0 6e-108 X-RAY
 2012-12-19 ILE A:121 A:122 6.0 0.034 E -60.1 122.9 6.0 0.034 0.0 HOH
 2.737
 O
 O
1l2h 1 P01584 98.69 1e-107 X-RAY
 2003-02-04 ILE A:122 A:122 6.0 0.034 E -58.8 127.3 6.0 0.034 0.0 HOH
 2.737
 O
 O
3ltq 1 P01584 90.0 4e-105 X-RAY
 2011-02-16 ILE A:140 A:122 4.0 0.023 E -60.1 127.9 4.0 0.023 0.0 HOH
 2.728
 O
 O
3pok 1 P01584 90.36 5e-102 X-RAY
 2011-01-19 ILE A:136 A:135 4.0 0.023 E -61.5 126.8 4.0 0.023 0.0 HOH
 2.759
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01584-f1 1 P01584 100.0 0.0 ILE A:238 A:238 5.0 0.029 E -58.5 130.0