Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 113590240 . T A CCDS2102.1:NM_000576.2:c.465caA>caT_NP_000567.1:p.155Q>H Homo sapiens interleukin 1 beta (IL1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5mvz 3 B5BUQ8 98.09 6e-111 X-RAY
 2017-02-15 GLN C:63 U:39 43.0 0.239 -73.1 152.1 43.0 0.239 0.0 HOH
 2.521
 O
 O
GLN F:63 V:39 39.0 0.217 -91.9 151.1 NA NA NA
7chy 3 P01584 100.0 4e-110 X-RAY
 2021-01-13 GLN C:43 I:155 36.0 0.2 S -66.1 138.5 36.0 0.2 0.0 HOH
 2.928
 O
 O
7chz 3 P01584 100.0 4e-110 X-RAY
 2021-01-13 GLN C:43 I:156 37.0 0.206 B -67.9 145.1 37.0 0.206 0.0 HOH
 2.334
 OE1
 O
1i1b 1 P01584 100.0 4e-110 X-RAY
 1990-01-15 GLN A:39 A:39 37.0 0.206 S -83.9 131.9 37.0 0.206 0.0 HOH
 2.447
 OE1
 O
1iob 1 P01584 100.0 4e-110 NMR
X-RAY
 1996-08-17 GLN A:39 A:39 41.0 0.228 B -88.2 137.0 41.0 0.228 0.0 HOH
 3.035
 OE1
 O
1itb 1 P01584 100.0 4e-110 X-RAY
 1998-02-04 GLN A:39 A:39 28.0 0.156 B -75.5 143.8 28.0 0.156 0.0 HOH
 4.975
 HE21
 H1
2i1b 1 P01584 100.0 4e-110 X-RAY
 1990-04-15 GLN A:39 A:39 36.0 0.2 B -63.6 145.6 36.0 0.2 0.0 HOH
 2.719
 O
 O
2nvh 1 P01584 100.0 4e-110 X-RAY
 2006-12-12 GLN A:39 A:39 39.0 0.217 S -67.3 150.6 39.0 0.217 0.0 HOH
 2.703
 O
 O
4i1b 1 P01584 100.0 4e-110 X-RAY
 1990-04-15 GLN A:39 A:39 33.0 0.183 S -96.3 141.7 33.0 0.183 0.0 HOH
 2.750
 OE1
 O
5bvp 2 P01584 100.0 4e-110 X-RAY
 2015-09-02 GLN B:39 I:39 14.0 0.078 S -56.8 130.1 11.0 0.061 0.017 A:None:0.017
 CL
HOH
 4.319
2.583
 NE2
OE1
 CL
O
5i1b 1 P01584 100.0 4e-110 X-RAY
 1992-01-15 GLN A:39 A:39 36.0 0.2 S -58.0 138.6 36.0 0.2 0.0 HOH
 2.742
 O
 O
5r7w 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 39.0 0.217 B -61.6 152.1 39.0 0.217 0.0 HOH
 2.675
 O
 O
5r85 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 38.0 0.211 S -66.8 151.6 38.0 0.211 0.0 HOH
 2.663
 O
 O
5r86 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 37.0 0.206 B -64.9 146.6 37.0 0.206 0.0 HOH
 2.647
 O
 O
5r87 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 B -69.3 150.7 36.0 0.2 0.0 HOH
 2.657
 O
 O
5r88 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 37.0 0.206 B -65.1 151.8 37.0 0.206 0.0 HOH
 2.636
 O
 O
5r89 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 40.0 0.222 S -64.6 149.8 40.0 0.222 0.0 HOH
 2.644
 O
 O
5r8a 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 S -59.1 147.4 36.0 0.2 0.0 S7G
HOH
 3.719
2.620
 O
O
 C3
O
5r8b 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 B -66.3 147.7 36.0 0.2 0.0 HOH
 2.616
 O
 O
5r8c 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 46.0 0.256 B -72.9 144.4 46.0 0.256 0.0 M25
HOH
 3.924
2.950
 O
NE2
 C6
O
5r8d 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 38.0 0.211 S -64.8 149.1 38.0 0.211 0.0 HOH
 2.627
 O
 O
5r8e 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 38.0 0.211 B -65.3 152.9 38.0 0.211 0.0 HOH
 2.698
 O
 O
5r8f 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 B -67.4 151.4 36.0 0.2 0.0 K3Y
HOH
 3.603
2.635
 O
O
 C7
O
5r8g 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 50.0 0.278 S -64.2 135.0 50.0 0.278 0.0 S7V
HOH
 3.581
2.497
 O
O
 C3
O
5r8h 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 39.0 0.217 S -68.1 151.2 39.0 0.217 0.0 T91
HOH
 2.495
2.790
 O
OE1
 N1
O
5r8i 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 S -66.6 150.1 36.0 0.2 0.0 HOH
 2.620
 O
 O
5r8j 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 29.0 0.161 S -67.1 142.7 29.0 0.161 0.0 S8D
HOH
 3.508
2.500
 O
O
 C7
O
5r8k 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 37.0 0.206 S -65.1 149.0 37.0 0.206 0.0 S8D
HOH
 3.295
2.649
 O
O
 C7
O
5r8l 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 35.0 0.194 B -68.1 150.4 35.0 0.194 0.0 HOH
 2.539
 O
 O
5r8m 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 B -65.1 154.3 36.0 0.2 0.0 HOH
 2.629
 O
 O
5r8n 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 37.0 0.206 B -67.3 151.3 37.0 0.206 0.0 HOH
 2.599
 O
 O
5r8o 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 B -65.4 150.2 36.0 0.2 0.0 HOH
 2.638
 O
 O
5r8p 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 36.0 0.2 B -66.7 151.6 36.0 0.2 0.0 HOH
 2.595
 O
 O
5r8q 1 P01584 100.0 4e-110 X-RAY
 2020-04-22 GLN A:39 A:39 40.0 0.222 S -66.5 151.3 40.0 0.222 0.0 HOH
 2.682
 O
 O
6y8i 1 P01584 100.0 4e-110 X-RAY
 2020-06-17 GLN A:39 A:39 35.0 0.194 B -70.7 151.9 35.0 0.194 0.0 OGE
HOH
 9.018
2.715
 NE2
O
 O
O
6y8m 1 P01584 100.0 4e-110 X-RAY
 2020-03-18 GLN A:39 A:39 37.0 0.206 B -72.3 148.1 37.0 0.206 0.0 SX2
HOH
 9.007
2.504
 OE1
O
 O2
O
9ilb 1 P01584 100.0 4e-110 X-RAY
 1999-01-06 GLN A:39 A:39 41.0 0.228 S -72.6 150.9 41.0 0.228 0.0 HOH
 2.764
 NE2
 O
4g6j 1 P01584 100.0 6e-110 X-RAY
 2012-12-19 GLN A:40 A:39 25.0 0.139 S -62.4 133.2 20.0 0.111 0.028 B:None:0.028
 HOH
 2.737
 OE1
 O
3o4o 1 P01584 100.0 8e-110 X-RAY
 2010-09-01 GLN A:44 A:39 22.0 0.122 S -60.6 130.5 22.0 0.122 0.0
4dep 1 P01584 100.0 8e-110 X-RAY
 2012-03-21 GLN A:44 A:39 41.0 0.228 B -74.5 129.0 40.0 0.222 0.006 B:P14778:0.006
GLN D:44 D:39 38.0 0.211 B -65.5 131.6 NA NA NA
1twm 1 P01584 99.35 9e-110 X-RAY
 2004-12-07 GLN A:39 A:39 34.0 0.189 B -59.0 145.1 34.0 0.189 0.0 HOH
 2.650
 O
 O
1twe 1 P01584 99.35 9e-110 X-RAY
 2004-12-07 GLN A:39 A:39 34.0 0.189 B -58.6 144.4 34.0 0.189 0.0 HOH
 2.646
 O
 O
1t4q 1 P01584 99.35 3e-109 X-RAY
 2004-12-07 GLN A:39 A:39 36.0 0.2 S -62.3 145.7 36.0 0.2 0.0 HOH
 2.604
 O
 O
1too 1 P01584 99.35 3e-109 X-RAY
 2004-12-07 GLN A:39 A:39 36.0 0.2 S -62.0 142.7 36.0 0.2 0.0 HOH
 2.719
 O
 O
1s0l 1 P01584 99.35 3e-109 X-RAY
 2004-03-30 GLN A:39 A:39 31.0 0.172 S -49.2 148.7 31.0 0.172 0.0 HOH
 2.558
 OE1
 O
21bi 1 P01584 99.35 4e-109 X-RAY
 1992-04-15 GLN A:39 A:39 34.0 0.189 S -94.0 141.6 34.0 0.189 0.0
41bi 1 P01584 99.35 4e-109 X-RAY
 1992-04-15 GLN A:39 A:39 39.0 0.217 -95.8 139.2 39.0 0.217 0.0
31bi 1 P01584 99.35 6e-109 X-RAY
 1992-04-15 GLN A:39 A:39 33.0 0.183 S -87.3 137.7 33.0 0.183 0.0
1hib 1 P01584 99.35 7e-109 X-RAY
 1994-01-31 GLN A:39 A:39 9.0 0.05 -80.7 150.4 9.0 0.05 0.0 HOH
 2.626
 OE1
 O
1tp0 1 P01584 98.04 2e-108 X-RAY
 2005-02-08 GLN A:39 A:39 31.0 0.172 S -55.9 141.1 31.0 0.172 0.0 HOH
 2.677
 OE1
 O
4g6m 1 P01584 100.0 6e-108 X-RAY
 2012-12-19 GLN A:38 A:39 37.0 0.206 B -56.7 143.4 37.0 0.206 0.0 HOH
 2.712
 O
 O
1l2h 1 P01584 98.69 1e-107 X-RAY
 2003-02-04 GLN A:39 A:39 32.0 0.178 S -76.6 148.9 32.0 0.178 0.0 HOH
 2.500
 O
 O
3ltq 1 P01584 90.0 4e-105 X-RAY
 2011-02-16 GLN A:40 A:39 32.0 0.178 B -54.1 127.8 32.0 0.178 0.0 HOH
 2.832
 O
 O
3pok 1 P01584 90.36 5e-102 X-RAY
 2011-01-19 GLN A:40 A:39 34.0 0.189 B -67.8 145.4 34.0 0.189 0.0 HOH
 2.674
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01584-f1 1 P01584 100.0 0.0 GLN A:155 A:155 18.0 0.1 B -62.3 134.0