Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 121047236 | . | G | A | CCDS2131.1:NM_002881.2:c.404cGg>cAg_NP_002872.1:p.135R>Q | Homo sapiens RAS like proto-oncogene B (RALB), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6zqt | 1 | P11234 | 99.46 | 1e-134 |
X-RAY |
2020-11-25 | ARG | A:135 | A:135 | 164.0 | 0.729 | G | -101.1 | 12.2 | 164.0 | 0.729 | 0.0 |
GNP HOH |
5.719 3.333 |
NH2 NH1 |
N2 O |
||
ARG | C:135 | B:135 | 152.0 | 0.676 | G | -110.2 | 12.6 | NA | NA | NA | |||||||||||||
6zrn | 1 | P11234 | 99.46 | 1e-134 |
X-RAY |
2020-11-25 | ARG | A:135 | A:135 | 148.0 | 0.658 | G | -104.7 | 13.4 | 148.0 | 0.658 | 0.0 |
GNP HOH |
7.417 3.632 |
NH1 C |
N2 O |
||
ARG | B:135 | B:135 | 169.0 | 0.751 | G | -103.9 | 14.0 | NA | NA | NA | |||||||||||||
2kwi | 1 | P11234 | 99.44 | 6e-129 |
NMR |
2010-09-01 | ARG | A:128 | A:135 | 178.0 | 0.791 | T | -82.8 | 7.2 | 178.0 | 0.791 | 0.0 |
GNP |
8.381 |
HD2 |
O6 |
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2bov | 1 | P11233 | 82.13 | 2e-117 |
X-RAY |
2005-04-15 | LYS | A:134 | A:134 | 129.0 | 0.645 | G | -106.7 | 11.4 | 129.0 | 0.645 | 0.0 |
GDP HOH |
6.485 3.203 |
NZ O |
N2 O |
||
6p0i | 1 | P11233 | 86.59 | 2e-112 |
X-RAY |
2020-03-04 | LYS | A:134 | B:134 | 132.0 | 0.66 | G | -112.5 | 15.9 | 132.0 | 0.66 | 0.0 |
GDP HOH |
6.675 2.543 |
HD2 HE3 |
HN21 O |
||
6p0j | 1 | P11233 | 86.59 | 2e-112 |
X-RAY |
2020-03-04 | LYS | A:134 | B:134 | 136.0 | 0.68 | G | -107.9 | 9.7 | 136.0 | 0.68 | 0.0 |
GDP HOH |
7.186 2.315 |
HG3 HZ2 |
HN21 O |
||
6p0k | 1 | P11233 | 86.59 | 2e-112 |
X-RAY |
2020-03-04 | LYS | A:134 | B:134 | 129.0 | 0.645 | G | -109.1 | 10.0 | 129.0 | 0.645 | 0.0 |
GDP HOH |
7.394 2.490 |
HG3 HZ2 |
HN21 O |
||
6p0l | 1 | P11233 | 86.59 | 2e-112 |
X-RAY |
2020-03-04 | LYS | A:134 | B:134 | 125.0 | 0.625 | G | -110.6 | 10.3 | 125.0 | 0.625 | 0.0 |
GDP HOH |
7.300 2.100 |
HG3 HZ2 |
HN21 O |
||
6p0m | 1 | P11233 | 86.59 | 2e-112 |
X-RAY |
2020-03-04 | LYS | A:134 | B:134 | 129.0 | 0.645 | G | -109.2 | 12.1 | 129.0 | 0.645 | 0.0 |
GDP HOH |
7.698 2.671 |
HG3 O |
HN21 O |
||
6p0n | 1 | P11233 | 86.59 | 2e-112 |
X-RAY |
2020-03-04 | LYS | A:134 | B:134 | 134.0 | 0.67 | G | -110.2 | 10.1 | 134.0 | 0.67 | 0.0 |
CL GDP HOH |
7.154 7.443 1.759 |
HG3 HG3 HZ1 |
CL HN21 O |
||
6p0o | 1 | P11233 | 86.59 | 2e-112 |
X-RAY |
2020-03-04 | LYS | A:134 | B:134 | 134.0 | 0.67 | G | -107.8 | 9.9 | 134.0 | 0.67 | 0.0 |
GDP HOH |
7.295 1.863 |
HG3 HZ1 |
HN21 O |
||
1uad | 1 | P11233 | 85.23 | 6e-109 |
X-RAY |
2003-07-15 | LYS | A:126 | A:134 | 143.0 | 0.715 | G | -113.7 | 12.6 | 143.0 | 0.715 | 0.0 |
GNP HOH |
8.450 2.797 |
CD O |
N2 O |
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LYS | B:126 | B:134 | 129.0 | 0.645 | G | -111.3 | 16.5 | NA | NA | NA | |||||||||||||
2a78 | 1 | P11233 | 85.23 | 1e-108 |
X-RAY |
2005-10-11 | LYS | A:138 | A:134 | 131.0 | 0.655 | G | -118.6 | 15.0 | 131.0 | 0.655 | 0.0 |
GDP HOH |
8.693 4.872 |
CB N |
N2 O |
||
2a9k | 1 | P11233 | 85.23 | 1e-108 |
X-RAY |
2005-10-11 | LYS | A:138 | A:134 | 135.0 | 0.675 | G | -117.7 | 20.1 | 135.0 | 0.675 | 0.0 |
GDP HOH |
8.846 2.810 |
CB O |
N2 O |
||
1zc3 | 1 | P11233 | 84.66 | 1e-107 |
X-RAY |
2005-06-14 | LYS | A:126 | A:134 | 118.0 | 0.59 | G | -107.2 | 13.6 | 118.0 | 0.59 | 0.0 |
GNP HOH |
7.021 2.709 |
NZ O |
N2 O |
||
LYS | C:126 | C:134 | 151.0 | 0.755 | G | -117.4 | 13.2 | NA | NA | NA | |||||||||||||
1zc4 | 1 | P11233 | 84.66 | 1e-107 |
X-RAY |
2005-06-14 | LYS | A:126 | A:134 | 122.0 | 0.61 | G | -92.5 | 6.8 | 122.0 | 0.61 | 0.0 |
GNP HOH |
7.110 9.987 |
NZ C |
N2 O |
||
LYS | C:126 | C:134 | 151.0 | 0.755 | G | -116.0 | 5.6 | NA | NA | NA | |||||||||||||
1u8y | 1 | P63320 | 86.39 | 1e-105 |
X-RAY |
2004-11-23 | LYS | A:124 | A:134 | 118.0 | 0.59 | G | -115.8 | 9.2 | 118.0 | 0.59 | 0.0 |
GNP HOH |
6.797 2.778 |
NZ O |
N2 O |
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LYS | B:124 | B:134 | 128.0 | 0.64 | G | -115.9 | 15.4 | NA | NA | NA | |||||||||||||
1u8z | 1 | P63320 | 86.39 | 1e-105 |
X-RAY |
2004-11-23 | LYS | A:124 | A:134 | 133.0 | 0.665 | G | -107.7 | 22.3 | 133.0 | 0.665 | 0.0 |
GDP HOH |
7.798 2.751 |
NZ O |
N2 O |
||
LYS | B:124 | B:134 | 138.0 | 0.69 | G | -113.8 | 9.6 | NA | NA | NA | |||||||||||||
1u90 | 1 | P63320 | 86.39 | 1e-105 |
X-RAY |
2004-11-23 | LYS | A:124 | A:134 | 128.0 | 0.64 | G | -130.8 | 6.8 | 128.0 | 0.64 | 0.0 |
GDP HOH |
7.883 5.216 |
NZ N |
N2 O |
||
LYS | B:124 | B:134 | 134.0 | 0.67 | G | -115.2 | 11.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11234-f1 | 1 | P11234 | 100.0 | 5e-153 | ARG | A:135 | A:135 | 176.0 | 0.782 | G | -112.5 | 10.8 | |
af-p11233-f1 | 1 | P11233 | 82.13 | 1e-117 | LYS | A:134 | A:134 | 121.0 | 0.605 | G | -109.0 | 8.8 |