Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 130737735 | . | T | A | CCDS46408.1:NM_032144.2:c.47cTg>cAg_NP_115520.2:p.16L>Q | Homo sapiens RAB6C, member RAS oncogene family (RAB6C), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4dkx | 1 | P20340 | 90.87 | 4e-136 |
X-RAY |
2012-10-17 | LEU | A:16 | A:16 | 1.0 | 0.006 | E | -122.0 | 124.1 | 1.0 | 0.006 | 0.0 |
HOH |
5.879 |
N |
O |
||
| LEU | B:16 | B:16 | 0.0 | 0.0 | E | -124.2 | 126.9 | NA | NA | NA | |||||||||||||
| 3bbp | 1 | P20340 | 89.32 | 3e-132 |
X-RAY |
2008-02-05 | LEU | A:19 | A:16 | 0.0 | 0.0 | E | -125.7 | 148.6 | 0.0 | 0.0 | 0.0 | ||||||
| LEU | B:19 | B:16 | 0.0 | 0.0 | E | -125.6 | 148.4 | 0.0 | 0.0 | 0.0 | |||||||||||||
| LEU | C:19 | C:16 | 0.0 | 0.0 | E | -125.2 | 148.0 | NA | NA | NA | |||||||||||||
| 5lef | 1 | P20340 | 88.48 | 3e-120 |
X-RAY |
2017-11-15 | LEU | A:12 | A:16 | 1.0 | 0.006 | E | -109.1 | 122.2 | 1.0 | 0.006 | 0.0 |
HOH |
7.113 |
H |
O |
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| LEU | B:12 | B:16 | 1.0 | 0.006 | E | -110.8 | 127.3 | 1.0 | 0.006 | 0.0 |
HOH |
9.343 |
H |
O |
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| 3cwz | 1 | P20340 | 89.36 | 1e-119 |
X-RAY |
2008-11-18 | LEU | A:9 | A:16 | 3.0 | 0.018 | E | -128.5 | 114.6 | 3.0 | 0.018 | 0.0 |
HOH |
9.841 |
N |
O |
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| 1yzq | 1 | P20340 | 91.18 | 5e-110 |
X-RAY |
2005-07-26 | LEU | A:9 | A:16 | 1.0 | 0.006 | E | -113.5 | 117.0 | 1.0 | 0.006 | 0.0 |
HOH |
5.830 |
N |
O |
||
| 2y8e | 1 | O18334 | 86.36 | 1e-109 |
X-RAY |
2011-07-06 | LEU | A:17 | A:15 | 0.0 | 0.0 | E | -125.2 | 148.1 | 0.0 | 0.0 | 0.0 |
SO4 HOH |
9.414 3.238 |
N N |
O1 O |
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| LEU | B:17 | B:15 | 0.0 | 0.0 | E | -127.4 | 142.9 | NA | NA | NA | |||||||||||||
| 2gil | 1 | P20340 | 89.51 | 3e-102 |
X-RAY |
2006-06-27 | LEU | A:4 | A:16 | 1.0 | 0.006 | E | -120.5 | 130.8 | 1.0 | 0.006 | 0.0 |
HOH |
6.813 |
C |
O |
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| LEU | B:4 | B:16 | 2.0 | 0.012 | E | -104.9 | 124.8 | NA | NA | NA | |||||||||||||
| LEU | C:4 | C:16 | 1.0 | 0.006 | E | -109.6 | 129.7 | NA | NA | NA | |||||||||||||
| LEU | D:4 | D:16 | 1.0 | 0.006 | E | -112.8 | 127.7 | NA | NA | NA | |||||||||||||
| 2e9s | 1 | Q9NRW1 | 83.95 | 4e-97 |
X-RAY |
2008-01-29 | LEU | A:5 | A:16 | 0.0 | 0.0 | E | -109.6 | 132.6 | 0.0 | 0.0 | 0.0 |
HOH |
7.307 |
O |
O |
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| LEU | B:5 | B:16 | 0.0 | 0.0 | E | -108.2 | 130.6 | NA | NA | NA | |||||||||||||
| LEU | C:5 | C:16 | 0.0 | 0.0 | E | -120.2 | 128.5 | NA | NA | NA | |||||||||||||
| 2fe4 | 1 | Q9NRW1 | 83.95 | 4e-97 |
X-RAY |
2006-07-04 | LEU | A:5 | A:16 | 0.0 | 0.0 | E | -106.1 | 118.5 | 0.0 | 0.0 | 0.0 |
HOH |
8.216 |
N |
O |
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| 2ffq | 1 | Q9NRW1 | 83.95 | 4e-97 |
X-RAY |
2006-07-04 | LEU | A:5 | A:16 | 1.0 | 0.006 | E | -109.3 | 131.3 | 1.0 | 0.006 | 0.0 |
HOH |
7.064 |
CD1 |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9h0n0-f1 | 1 | Q9H0N0 | 100.0 | 0.0 | LEU | A:16 | A:16 | 0.0 | 0.0 | E | -117.6 | 134.8 | |
| af-q53s08-f1 | 1 | Q53S08 | 98.82 | 0.0 | LEU | A:16 | A:16 | 1.0 | 0.006 | E | -119.9 | 132.9 | |
| af-p20340-f1 | 1 | P20340 | 89.9 | 2e-136 | LEU | A:16 | A:16 | 0.0 | 0.0 | E | -114.4 | 124.1 | |
| af-q9nrw1-f1 | 1 | Q9NRW1 | 82.21 | 2e-126 | LEU | A:16 | A:16 | 1.0 | 0.006 | E | -115.1 | 124.4 | |