Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 130737992 . C A CCDS46408.1:NM_032144.2:c.304Cag>Aag_NP_115520.2:p.102Q>K Homo sapiens RAB6C, member RAS oncogene family (RAB6C), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4dkx 1 P20340 90.87 4e-136 X-RAY
 2012-10-17 GLN A:102 A:102 117.0 0.65 H -54.8 -36.7 117.0 0.65 0.0 HOH
 2.590
 O
 O
GLN B:102 B:102 105.0 0.583 H -52.3 -42.3 NA NA NA
3bbp 1 P20340 89.32 3e-132 X-RAY
 2008-02-05 GLN A:105 A:102 103.0 0.572 H -61.6 -40.0 103.0 0.572 0.0
GLN B:105 B:102 105.0 0.583 H -61.3 -39.5 105.0 0.583 0.0
GLN C:105 C:102 104.0 0.578 H -61.2 -39.9 NA NA NA
5lef 1 P20340 88.48 3e-120 X-RAY
 2017-11-15 GLN A:98 A:102 116.0 0.644 H -62.1 -31.1 116.0 0.644 0.0 HOH
 2.461
 OE1
 O
GLN B:98 B:102 105.0 0.583 H -58.1 -37.1 105.0 0.583 0.0 HOH
 2.270
 OE1
 O
3cwz 1 P20340 89.36 1e-119 X-RAY
 2008-11-18 GLN A:95 A:102 119.0 0.661 H -54.1 -65.8 119.0 0.661 0.0
1yzq 1 P20340 91.18 5e-110 X-RAY
 2005-07-26 GLN A:95 A:102 113.0 0.628 H -59.7 -41.4 113.0 0.628 0.0 HOH
 3.043
 O
 O
2y8e 1 O18334 86.36 1e-109 X-RAY
 2011-07-06 HIS A:103 A:101 105.0 0.538 H -65.1 -30.5 105.0 0.538 0.0 HOH
 2.664
 ND1
 O
HIS B:103 B:101 126.0 0.646 H -55.1 -43.7 NA NA NA
2gil 1 P20340 89.51 3e-102 X-RAY
 2006-06-27 GLN A:90 A:102 115.0 0.639 H -56.7 -36.0 115.0 0.639 0.0 HOH
 2.777
 O
 O
GLN B:90 B:102 107.0 0.594 H -63.8 -41.7 NA NA NA
GLN C:90 C:102 121.0 0.672 H -69.0 -17.4 NA NA NA
GLN D:90 D:102 111.0 0.617 H -54.6 -44.5 NA NA NA
2e9s 1 Q9NRW1 83.95 4e-97 X-RAY
 2008-01-29 GLN A:91 A:102 105.0 0.583 H -61.2 -34.2 105.0 0.583 0.0 HOH
 2.895
 OE1
 O
GLN B:91 B:102 129.0 0.717 H -62.7 -38.0 NA NA NA
GLN C:91 C:102 112.0 0.622 H -59.9 -34.0 NA NA NA
2fe4 1 Q9NRW1 83.95 4e-97 X-RAY
 2006-07-04 GLN A:91 A:102 116.0 0.644 H -55.3 -42.0 116.0 0.644 0.0 HOH
 3.177
 CB
 O
2ffq 1 Q9NRW1 83.95 4e-97 X-RAY
 2006-07-04 GLN A:91 A:102 104.0 0.578 H -57.0 -39.8 104.0 0.578 0.0 HOH
 2.738
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h0n0-f1 1 Q9H0N0 100.0 0.0 GLN A:102 A:102 117.0 0.65 H -60.3 -45.2
af-q53s08-f1 1 Q53S08 98.82 0.0 GLN A:102 A:102 114.0 0.633 H -61.7 -44.2
af-p20340-f1 1 P20340 89.9 2e-136 GLN A:102 A:102 111.0 0.617 H -59.8 -44.5
af-q9nrw1-f1 1 Q9NRW1 82.21 2e-126 GLN A:102 A:102 103.0 0.572 H -58.8 -39.4