Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 138771495 . A C CCDS2181.1:NM_006895.2:c.674gAt>gCt_NP_008826.1:p.225D>A Homo sapiens histamine N-methyltransferase (HNMT), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jqd 1 P50135 100.0 0.0 X-RAY
2002-08-06 ASP A:225 A:225 30.0 0.2 E -75.0 105.1 30.0 0.2 0.0 HOH
2.815
O
O
ASP B:225 B:225 48.0 0.32 E -71.5 102.2 NA NA NA
2aot 1 P50135 100.0 0.0 X-RAY
2005-09-13 ASP A:225 A:225 23.0 NA E -57.8 98.6 23.0 NA NA HOH
8.261
N
O
2aot 2 P50135 100.0 0.0 X-RAY
2005-09-13 ASP B:225 B:225 45.0 0.3 E -65.4 111.7 NA NA NA
2aou 1 P50135 100.0 0.0 X-RAY
2005-09-13 ASP A:225 A:225 13.0 0.087 E -75.6 101.1 13.0 0.087 0.0 HOH
2.568
OD1
O
2aou 2 P50135 100.0 0.0 X-RAY
2005-09-13 ASP B:225 B:225 23.0 0.153 E -76.3 96.6 NA NA NA
2aov 1 P50135 100.0 0.0 X-RAY
2005-09-13 ASP A:225 A:225 43.0 0.287 E -67.2 108.0 43.0 0.287 0.0 HOH
9.889
N
O
ASP B:225 B:225 32.0 0.213 E -69.7 110.2 NA NA NA
2aox 1 P50135 100.0 0.0 X-RAY
2005-09-13 ASP A:225 A:225 48.0 0.32 E -71.1 105.9 48.0 0.32 0.0
ASP B:225 B:225 46.0 0.307 E -72.0 105.0 NA NA NA
1jqe 1 P50135 99.66 0.0 X-RAY
2002-08-06 ASP A:225 A:225 59.0 0.393 E -72.8 101.8 59.0 0.393 0.0 HOH
2.649
OD1
O
ASP B:225 B:225 62.0 0.413 E -50.4 110.2 NA NA NA
2aow 1 P50135 99.66 0.0 X-RAY
2005-09-13 ASP A:225 A:225 51.0 0.34 E -71.8 101.9 51.0 0.34 0.0
ASP B:225 B:225 51.0 0.34 E -73.6 101.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50135-f1 1 P50135 100.0 0.0 ASP A:225 A:225 26.0 0.173 E -72.9 105.4