Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 204735359 . G A CCDS2362.1:NM_005214.4:c.160Gcc>Acc_NP_005205.2:p.54A>T Homo sapiens cytotoxic T-lymphocyte associated protein 4 (CTLA4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3osk 1 P16410 98.44 1e-90 X-RAY
 2010-12-08 ALA A:19 A:19 2.0 0.017 E -126.1 143.0 2.0 0.017 0.0 NAG
HOH
 7.016
3.409
 C
CA
 C5
O
ALA B:19 B:19 1.0 0.009 E -113.0 139.1 1.0 0.009 0.0 HOH
 3.458
 CA
 O
5xj3 3 P16410 100.0 1e-90 X-RAY
 2018-04-25 ALA C:20 C:54 0.0 0.0 E -119.5 116.5 NA NA NA
ALA F:20 F:54 0.0 0.0 E -118.8 118.4 NA NA NA
ALA I:20 I:54 0.0 0.0 E -119.5 113.9 NA NA NA
ALA L:20 L:54 0.0 0.0 E -113.2 119.3 NA NA NA
1i85 2 P16410 100.0 2e-90 X-RAY
 2001-04-04 ALA C:19 C:19 1.0 0.009 B -101.8 142.7 1.0 0.009 0.0
ALA D:19 D:19 1.0 0.009 B -110.8 127.9 1.0 0.009 0.0
5ggv 3 P16410 100.0 2e-90 X-RAY
 2016-11-09 ALA C:19 Y:19 3.0 0.026 E -129.8 139.8 3.0 0.026 0.0 HOH
 3.546
 CA
 O
7elx 3 P16410 100.0 2e-90 X-RAY
 2021-06-30 ALA E:19 c:19 6.0 0.052 E -127.6 136.9 NA NA NA
ALA F:19 C:19 2.0 0.017 E -125.5 138.5 2.0 0.017 0.0 HOH
 3.838
 CA
 O
1i8l 2 P16410 99.21 9e-90 X-RAY
 2001-04-04 ALA C:19 C:19 2.0 0.017 E -133.9 134.1 2.0 0.017 0.0 NAG
 7.299
 O
 O6
ALA D:19 D:19 3.0 0.026 -132.4 153.4 NA NA NA
2x44 1 P16410 97.66 1e-89 X-RAY
 2010-04-07 ALA A:20 D:19 14.0 0.122 E -122.0 133.4 1.0 0.009 0.113 A:P16410:0.113
 HOH
 4.509
 N
 O
1ah1 1 P16410 100.0 1e-89 NMR
 1998-04-15 ALA A:18 A:17 0.0 0.0 E -108.8 114.2 0.0 0.0 0.0 NAG
NAG
 5.801
6.514
 C
C
 H82
O7
6rqm 2 P16410 100.0 1e-89 X-RAY
 2020-07-08 ALA B:18 A:19 67.0 0.583 360.0 90.3 67.0 0.583 0.0
3bx7 1 P16410 100.0 5e-89 X-RAY
 2009-01-20 ALA A:17 C:19 2.0 0.017 E -135.6 133.6 2.0 0.017 0.0 HOH
 6.504
 O
 O
6xy2 1 P16410 100.0 6e-88 X-RAY
 2020-12-09 ALA A:17 A:19 0.0 0.0 E -115.4 142.3 0.0 0.0 0.0 NAG
 6.024
 C
 H5
6rpj 1 P16410 100.0 2e-85 X-RAY
 2020-07-08 ALA A:18 A:19 2.0 0.017 E -140.2 106.6 NA NA NA
ALA C:18 C:19 2.0 0.017 E -139.3 106.9 NA NA NA
ALA E:18 E:19 2.0 0.017 E -140.6 107.5 NA NA NA
ALA G:18 G:19 2.0 0.017 E -139.5 104.8 2.0 0.017 0.0 NAG
 7.650
 C
 C5
7dv4 1 P16410 100.0 1e-83 X-RAY
 2022-01-12 ALA A:19 A:19 2.0 0.017 E -121.6 139.4 2.0 0.017 0.0 HOH
 4.642
 N
 O
ALA C:19 C:19 2.0 0.017 E -125.3 142.4 NA NA NA
ALA E:19 E:19 3.0 0.026 E -132.2 122.7 NA NA NA
ALA G:19 G:19 2.0 0.017 E -136.2 137.7 2.0 0.017 0.0 HOH
 8.539
 N
 O
5tru 3 P16410 100.0 2e-83 X-RAY
 2017-05-10 ALA E:18 c:19 2.0 0.017 E -137.1 122.1 NA NA NA
ALA F:18 C:19 1.0 0.009 E -114.2 129.7 1.0 0.009 0.0
6rp8 3 P16410 100.0 2e-83 X-RAY
 2020-07-08 ALA E:18 C:19 2.0 0.017 E -131.0 144.2 NA NA NA
ALA F:18 c:19 4.0 0.035 E -125.4 149.9 4.0 0.035 0.0
4kkn 1 Q28090 80.65 3e-70 X-RAY
 2013-06-12 ALA A:24 A:52 0.0 0.0 E -124.0 137.1 0.0 0.0 0.0 HOH
 6.509
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16410-f1 1 P16410 100.0 2e-168 ALA A:54 A:54 1.0 0.009 E -122.2 131.9