Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 219268088 . T A CCDS56166.1:NM_001206878.1:c.602gTg>gAg_NP_001193807.1:p.201V>E Homo sapiens CTD small phosphatase 1 (CTDSP1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ta0 1 Q9GZU7 99.46 1e-135 X-RAY
 2004-08-31 VAL A:127 A:202 0.0 0.0 E -135.4 139.1 0.0 0.0 0.0 HOH
 4.361
 CG2
 O
1t9z 1 Q9GZU7 98.39 3e-135 X-RAY
 2004-08-31 VAL A:127 A:202 0.0 0.0 E -139.9 136.6 0.0 0.0 0.0 HOH
 4.464
 CG2
 O
4ygy 1 Q9GZU7 99.46 1e-134 X-RAY
 2015-09-16 VAL A:130 A:202 0.0 0.0 E -137.0 143.9 0.0 0.0 0.0 HOH
 6.085
 CG2
 O
VAL B:130 B:202 0.0 0.0 E -128.9 141.1 NA NA NA
4yh1 1 Q9GZU7 99.46 1e-134 X-RAY
 2015-09-16 VAL A:130 A:202 0.0 0.0 E -132.9 138.2 0.0 0.0 0.0 HOH
 5.386
 CG2
 O
VAL B:130 B:202 0.0 0.0 E -139.1 138.8 NA NA NA
3pgl 1 Q9GZU7 100.0 4e-131 X-RAY
 2011-03-09 VAL A:126 A:202 0.0 0.0 E -136.9 130.4 0.0 0.0 0.0 HOH
 5.765
 CG2
 O
VAL B:126 B:202 0.0 0.0 E -139.4 132.3 NA NA NA
6du2 1 A0A1S2ZIN9 99.44 1e-130 X-RAY
 2018-09-26 VAL A:126 A:202 0.0 0.0 E -130.8 138.0 0.0 0.0 0.0 HOH
 7.239
 N
 O
VAL B:126 B:202 0.0 0.0 E -133.8 129.5 NA NA NA
6du3 1 Q9GZU7 99.44 1e-130 X-RAY
 2018-09-26 VAL A:126 A:202 0.0 0.0 E -129.9 137.0 0.0 0.0 0.0 HOH
 7.340
 N
 O
VAL B:126 B:202 0.0 0.0 E -138.0 132.2 NA NA NA
2ghq 1 Q9GZU7 99.44 2e-130 X-RAY
 2006-12-05 VAL A:127 A:202 0.0 0.0 E -139.3 140.4 0.0 0.0 0.0 HOH
 4.192
 CG2
 O
VAL B:127 B:202 0.0 0.0 E -133.6 141.1 NA NA NA
2ght 1 Q9GZU7 99.44 2e-130 X-RAY
 2006-12-05 VAL A:127 A:202 0.0 0.0 E -129.9 140.0 0.0 0.0 0.0 HOH
 4.198
 CG2
 O
VAL B:127 B:202 0.0 0.0 E -132.9 137.0 NA NA NA
3l0y 1 Q9GZU7 99.44 3e-130 X-RAY
 2010-03-23 VAL A:130 A:202 0.0 0.0 E -133.7 136.2 0.0 0.0 0.0 HOH
 4.423
 CG2
 O
VAL B:130 B:202 0.0 0.0 E -131.5 134.9 NA NA NA
3l0b 1 Q9GZU7 99.44 3e-130 X-RAY
 2010-03-23 VAL A:130 A:202 0.0 0.0 E -135.1 134.1 0.0 0.0 0.0 HOH
 4.962
 CG2
 O
VAL B:130 B:202 0.0 0.0 E -128.3 134.6 NA NA NA
3l0c 1 Q9GZU7 99.44 3e-130 X-RAY
 2010-03-23 VAL A:130 A:202 0.0 0.0 E -129.9 136.6 0.0 0.0 0.0 HOH
 6.738
 CG2
 O
VAL B:130 B:202 0.0 0.0 E -146.7 130.4 NA NA NA
2hhl 1 O15194 82.29 3e-107 X-RAY
 2006-08-29 VAL A:140 A:140 3.0 0.019 E -117.0 133.8 3.0 0.019 0.0 HOH
 5.121
 CG2
 O
VAL B:140 B:140 3.0 0.019 E -123.8 132.6 NA NA NA
VAL C:140 C:140 3.0 0.019 E -123.6 134.5 NA NA NA
VAL D:140 D:140 3.0 0.019 E -121.3 128.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9gzu7-f1 1 Q9GZU7 100.0 0.0 VAL A:202 A:202 0.0 0.0 E -123.5 135.3