Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241808612 . T A CCDS2543.1:NM_000030.2:c.191aTc>aAc_NP_000021.1:p.64I>N Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 ILE A:64 A:64 0.0 0.0 H -69.2 -35.1 0.0 0.0 0.0 HOH
 7.492
 O
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 ILE A:64 A:64 0.0 0.0 H -67.6 -38.5 0.0 0.0 0.0 HOH
 7.474
 O
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ILE A:64 A:64 0.0 0.0 H -66.6 -32.0 0.0 0.0 0.0 HOH
 7.818
 O
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ILE A:64 A:64 11.0 NA H -62.8 -41.5 11.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 ILE A:66 A:64 0.0 0.0 H -67.1 -42.0 0.0 0.0 0.0 HOH
 6.293
 C
 O
ILE C:66 C:64 0.0 0.0 H -64.6 -38.9 0.0 0.0 0.0 HOH
 7.679
 O
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 ILE A:64 A:64 0.0 0.0 H -72.6 -33.9 0.0 0.0 0.0 HOH
 7.680
 O
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 ILE A:66 A:64 0.0 0.0 H -65.3 -47.8 0.0 0.0 0.0 HOH
 7.575
 O
 O
ILE B:66 C:64 0.0 0.0 H -68.6 -45.8 0.0 0.0 0.0 BME
HOH
 9.538
7.591
 CD1
O
 O1
O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 ILE A:66 A:64 0.0 0.0 H -66.3 -33.9 0.0 0.0 0.0
ILE B:66 B:64 0.0 0.0 H -66.2 -32.7 0.0 0.0 0.0
ILE C:66 C:64 0.0 0.0 H -67.3 -33.6 NA NA NA
ILE D:66 D:64 0.0 0.0 H -65.0 -35.4 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 ILE A:64 A:64 0.0 0.0 H -68.2 -31.9 0.0 0.0 0.0 HOH
 7.520
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 ILE A:75 A:64 0.0 0.0 H -66.5 -40.6 0.0 0.0 0.0 HOH
 6.113
 C
 O
ILE B:75 B:64 0.0 0.0 H -66.6 -43.3 0.0 0.0 0.0 HOH
 6.052
 C
 O
ILE C:75 E:64 0.0 0.0 H -65.5 -42.9 NA NA NA
ILE D:75 G:64 0.0 0.0 H -65.8 -43.3 NA NA NA
ILE E:75 M:64 0.0 0.0 H -66.1 -45.2 NA NA NA
ILE F:75 N:64 0.0 0.0 H -65.9 -43.9 NA NA NA
ILE G:75 S:64 0.0 0.0 H -69.8 -39.8 NA NA NA
ILE H:75 T:64 0.0 0.0 H -69.5 -44.2 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 ILE A:66 A:64 0.0 0.0 H -71.1 -38.5 0.0 0.0 0.0
ILE B:66 C:64 0.0 0.0 H -75.8 -40.3 0.0 0.0 0.0
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 ILE A:64 A:64 0.0 0.0 H -70.1 -35.3 0.0 0.0 0.0 HOH
 6.048
 C
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 ILE A:64 A:64 0.0 0.0 H -70.6 -31.5 0.0 0.0 0.0 HOH
 7.158
 O
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 ILE A:59 A:64 0.0 0.0 H -63.7 -43.5 0.0 0.0 0.0 HOH
 6.272
 C
 O
ILE B:59 B:64 0.0 0.0 H -64.6 -42.6 0.0 0.0 0.0 HOH
 6.031
 C
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 ILE A:59 A:64 0.0 0.0 H -64.1 -43.3 0.0 0.0 0.0 HOH
 6.299
 N
 O
ILE B:59 B:64 0.0 0.0 H -64.5 -44.7 0.0 0.0 0.0 HOH
 5.835
 C
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 ILE A:64 A:64 0.0 0.0 H -63.3 -41.4 0.0 0.0 0.0 HOH
 6.139
 C
 O
ILE B:64 B:64 0.0 0.0 H -65.0 -40.1 0.0 0.0 0.0 HOH
 6.419
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 ILE A:64 A:64 0.0 0.0 H -62.8 -47.3