Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241808619 . C A CCDS2543.1:NM_000030.2:c.198taC>taA_NP_000021.1:p.66Y>* Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 TYR A:66 A:66 85.0 0.37 H -65.3 -50.2 7.0 0.03 0.34 A:P21549:0.339
 HOH
 2.756
 OH
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 TYR A:66 A:66 86.0 0.374 H -61.5 -48.7 12.0 0.052 0.322 A:P21549:0.322
 HOH
 4.765
 CB
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 TYR A:66 A:66 87.0 0.378 H -59.8 -55.2 11.0 0.048 0.33 A:P21549:0.33
 HOH
 5.945
 O
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 TYR A:66 A:66 84.0 0.365 H -53.6 -55.6 15.0 0.065 0.3 A:P21549:0.3
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 TYR A:68 A:66 77.0 0.335 H -64.0 -47.2 6.0 0.026 0.309 C:P21549:0.309
 HOH
 2.411
 OH
 O
TYR C:68 C:66 80.0 0.348 H -62.4 -55.0 5.0 0.022 0.326 A:P21549:0.326
 HOH
 4.171
 OH
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 TYR A:66 A:66 82.0 0.357 H -62.2 -43.3 8.0 0.035 0.322 A:P21549:0.322
 HOH
 5.802
 O
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 TYR A:68 A:66 84.0 0.365 H -69.4 -54.5 6.0 0.026 0.339 B:P21549:0.339
 HOH
 2.485
 OH
 O
TYR B:68 C:66 79.0 0.343 H -69.2 -52.2 6.0 0.026 0.317 A:P21549:0.317
 HOH
 2.720
 OH
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 TYR A:68 A:66 76.0 0.33 H -63.4 -57.3 4.0 0.017 0.313 B:P21549:0.313
TYR B:68 B:66 78.0 0.339 H -63.8 -56.9 4.0 0.017 0.322 A:P21549:0.322
TYR C:68 C:66 81.0 0.352 H -62.6 -57.9 NA NA NA
TYR D:68 D:66 80.0 0.348 H -61.7 -58.7 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 TYR A:66 A:66 77.0 0.335 H -71.2 -62.7 77.0 0.335 0.0 HOH
 2.879
 OH
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 TYR A:77 A:66 80.0 0.348 H -68.3 -54.1 7.0 0.03 0.318 B:P21549:0.317
 HOH
 2.636
 OH
 O
TYR B:77 B:66 82.0 0.357 H -66.8 -53.8 8.0 0.035 0.322 A:P21549:0.322
 HOH
 2.555
 OH
 O
TYR C:77 E:66 82.0 0.357 H -70.4 -53.4 NA NA NA
TYR D:77 G:66 80.0 0.348 H -67.6 -52.3 NA NA NA
TYR E:77 M:66 81.0 0.352 H -62.5 -54.2 NA NA NA
TYR F:77 N:66 80.0 0.348 H -67.8 -52.7 NA NA NA
TYR G:77 S:66 81.0 0.352 H -69.7 -51.9 NA NA NA
TYR H:77 T:66 83.0 0.361 H -66.1 -51.3 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 TYR A:68 A:66 80.0 0.348 H -75.5 -46.5 6.0 0.026 0.322 B:P21549:0.322
 HOH
 5.029
 OH
 O
TYR B:68 C:66 80.0 0.348 H -71.9 -53.2 7.0 0.03 0.318 A:P21549:0.317
 HOH
 8.860
 CB
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 TYR A:66 A:66 81.0 0.352 H -57.2 -55.3 7.0 0.03 0.322 A:P21549:0.322
 HOH
 3.222
 OH
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 TYR A:66 A:66 81.0 0.352 H -61.7 -57.3 5.0 0.022 0.33 A:P21549:0.33
 HOH
 2.990
 OH
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 TYR A:61 A:66 80.0 0.348 H -72.2 -51.4 4.0 0.017 0.331 B:P21549:0.33
 HOH
 2.690
 OH
 O
TYR B:61 B:66 80.0 0.348 H -71.0 -51.7 7.0 0.03 0.318 A:P21549:0.317
 HOH
 2.685
 OH
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 TYR A:61 A:66 77.0 0.335 H -69.1 -51.8 4.0 0.017 0.318 B:P21549:0.317
 HOH
 1.902
 HH
 O
TYR B:61 B:66 82.0 0.357 H -69.3 -54.2 6.0 0.026 0.331 A:P21549:0.33
 HOH
 1.895
 HH
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 TYR A:66 A:66 81.0 0.352 H -69.0 -51.4 7.0 0.03 0.322 B:P21549:0.322
 HOH
 2.628
 OH
 O
TYR B:66 B:66 83.0 0.361 H -67.0 -53.3 7.0 0.03 0.331 A:P21549:0.33
 HOH
 2.507
 OH
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 TYR A:66 A:66 74.0 0.322 H -62.8 -54.6