Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241808704 . G A CCDS2543.1:NM_000030.2:c.283Gag>Aag_NP_000021.1:p.95E>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLU A:95 A:95 35.0 0.184 -106.8 145.1 35.0 0.184 0.0 HOH
 3.471
 CA
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLU A:95 A:95 39.0 0.205 -69.8 155.6 39.0 0.205 0.0
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:95 A:95 34.0 0.179 -81.3 156.0 34.0 0.179 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:95 A:95 36.0 0.189 -101.4 143.5 36.0 0.189 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLU A:97 A:95 42.0 0.221 -100.0 155.3 42.0 0.221 0.0 HOH
 3.500
 CA
 O
GLU C:97 C:95 40.0 0.211 -101.3 156.6 40.0 0.211 0.0 HOH
 3.515
 CA
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLU A:95 A:95 41.0 0.216 -85.1 141.3 41.0 0.216 0.0 HOH
 4.052
 C
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLU A:97 A:95 38.0 0.2 -102.2 155.7 38.0 0.2 0.0 HOH
 3.395
 C
 O
GLU B:97 C:95 48.0 0.253 -105.7 155.2 48.0 0.253 0.0 HOH
 3.582
 CA
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLU A:97 A:95 43.0 0.226 -96.9 137.4 43.0 0.226 0.0
GLU B:97 B:95 42.0 0.221 -97.8 138.4 42.0 0.221 0.0
GLU C:97 C:95 43.0 0.226 -97.0 139.2 NA NA NA
GLU D:97 D:95 44.0 0.232 -96.0 138.6 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLU A:95 A:95 44.0 0.232 -94.1 149.5 44.0 0.232 0.0 HOH
 3.758
 OE2
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLU A:106 A:95 46.0 0.242 -97.6 153.7 46.0 0.242 0.0 HOH
 2.786
 OE2
 O
GLU B:106 B:95 42.0 0.221 -97.2 156.6 42.0 0.221 0.0 HOH
 2.721
 OE2
 O
GLU C:106 E:95 45.0 0.237 -101.3 156.6 NA NA NA
GLU D:106 G:95 43.0 0.226 -96.6 158.8 NA NA NA
GLU E:106 M:95 37.0 0.195 -99.7 157.1 NA NA NA
GLU F:106 N:95 47.0 0.247 -103.5 159.4 NA NA NA
GLU G:106 S:95 43.0 0.226 -98.3 158.6 NA NA NA
GLU H:106 T:95 43.0 0.226 -100.9 154.1 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLU A:97 A:95 39.0 0.205 -102.0 156.1 39.0 0.205 0.0
GLU B:97 C:95 43.0 0.226 -98.9 150.3 43.0 0.226 0.0 HOH
 6.766
 O
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLU A:95 A:95 37.0 0.195 -75.7 152.8 37.0 0.195 0.0 HOH
 9.984
 N
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLU A:95 A:95 35.0 0.184 -88.6 150.9 35.0 0.184 0.0 HOH
 3.430
 OE2
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLU A:90 A:95 25.0 0.132 -106.7 153.4 25.0 0.132 0.0 HOH
 2.752
 HA
 O
GLU B:90 B:95 36.0 0.189 -92.8 156.0 36.0 0.189 0.0 HOH
 2.630
 OE2
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLU A:90 A:95 29.0 0.153 -108.6 153.2 29.0 0.153 0.0 HOH
 2.806
 HA
 O
GLU B:90 B:95 41.0 0.216 -91.2 153.4 41.0 0.216 0.0 HOH
 2.754
 OE2
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLU A:95 A:95 41.0 0.216 -98.6 155.7 41.0 0.216 0.0 HOH
 2.416
 OE2
 O
GLU B:95 B:95 20.0 0.105 -112.3 161.6 20.0 0.105 0.0 HOH
 2.637
 OE2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLU A:95 A:95 35.0 0.184 -103.2 155.3