Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241810066 . C A CCDS2543.1:NM_000030.2:c.364Cga>Aga_NP_000021.1:p.122R>R Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 ARG A:122 NA:NA DO NA DO DO DO NA NA NA
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 ARG A:122 A:122 37.0 NA E -88.2 92.0 37.0 NA NA
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ARG A:122 A:122 39.0 NA E -83.7 112.4 39.0 NA NA
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ARG A:122 A:122 40.0 NA E -74.9 107.9 40.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 ARG A:124 A:122 152.0 0.676 74.2 39.5 152.0 0.676 0.0 HOH
 3.039
 CD
 O
ARG C:124 C:122 161.0 0.716 E -80.5 102.7 161.0 0.716 0.0 HOH
 3.596
 CA
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 ARG A:122 A:122 41.0 NA E -79.0 97.9 41.0 NA NA HOH
 3.018
 O
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 ARG A:124 A:122 172.0 0.764 E -86.7 97.6 172.0 0.764 0.0 HOH
 2.992
 NH1
 O
ARG B:124 C:122 161.0 0.716 E -89.1 100.5 161.0 0.716 0.0 HOH
 2.907
 NH2
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 ARG A:124 A:122 66.0 NA E -94.3 96.2 66.0 NA NA
ARG B:124 B:122 154.0 0.684 E -95.1 96.7 154.0 0.684 0.0
ARG C:124 C:122 187.0 0.831 E -95.5 97.0 NA NA NA
ARG D:124 D:122 129.0 NA E -96.2 96.0 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 ARG A:122 A:122 44.0 NA -74.8 96.6 44.0 NA NA HOH
 6.832
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 ARG A:133 A:122 170.0 0.756 E -92.4 100.9 170.0 0.756 0.0 HOH
 3.756
 CA
 O
ARG B:133 B:122 162.0 0.72 E -96.8 101.9 162.0 0.72 0.0 HOH
 3.231
 NH1
 O
ARG C:133 E:122 155.0 0.689 E -90.0 103.4 NA NA NA
ARG D:133 G:122 138.0 0.613 E -91.9 100.2 NA NA NA
ARG E:133 M:122 154.0 0.684 E -90.6 103.7 NA NA NA
ARG F:133 N:122 180.0 0.8 E -91.7 100.2 NA NA NA
ARG G:133 S:122 170.0 0.756 E -91.4 102.0 NA NA NA
ARG H:133 T:122 157.0 0.698 E -87.0 101.4 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 ARG A:124 A:122 159.0 0.707 E -83.1 100.0 159.0 0.707 0.0
ARG B:124 C:122 156.0 0.693 E -89.5 106.6 156.0 0.693 0.0 HOH
 5.973
 CG
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 ARG A:122 A:122 38.0 NA E -80.0 76.3 38.0 NA NA
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 ARG A:122 A:122 162.0 0.72 E -90.2 98.3 162.0 0.72 0.0 HOH
 8.575
 N
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 ARG A:117 A:122 165.0 0.733 E -90.2 103.4 165.0 0.733 0.0 HOH
 8.867
 N
 O
ARG B:117 B:122 115.0 0.511 E -92.5 106.9 115.0 0.511 0.0 HOH
 1.361
 HH21
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 ARG A:117 A:122 170.0 0.756 E -92.0 105.7 170.0 0.756 0.0 HOH
 8.908
 N
 O
ARG B:117 B:122 124.0 0.551 E -92.4 103.0 124.0 0.551 0.0 HOH
 1.520
 HH21
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 ARG A:122 A:122 166.0 0.738 E -89.3 101.8 166.0 0.738 0.0 HOH
 2.472
 NE
 O
ARG B:122 B:122 178.0 0.791 E -90.7 102.3 178.0 0.791 0.0 HOH
 2.775
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 ARG A:122 A:122 135.0 0.6 E -84.3 98.1