Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241810096 . G A CCDS2543.1:NM_000030.2:c.394Ggc>Agc_NP_000021.1:p.132G>S Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLY A:132 A:132 17.0 0.227 -92.8 161.9 17.0 0.227 0.0 HOH
 3.680
 CA
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLY A:132 A:132 22.0 0.293 -71.8 162.1 22.0 0.293 0.0 HOH
 9.792
 O
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLY A:132 A:132 25.0 0.333 -72.6 163.7 25.0 0.333 0.0 HOH
 8.450
 O
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLY A:132 A:132 26.0 0.347 -75.3 154.5 26.0 0.347 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLY A:134 A:132 18.0 0.24 -88.0 166.0 18.0 0.24 0.0 HOH
 2.796
 O
 O
GLY C:134 C:132 16.0 0.213 -80.7 160.1 16.0 0.213 0.0 HOH
 2.969
 O
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLY A:132 A:132 20.0 0.267 -78.9 157.9 20.0 0.267 0.0 HOH
 7.282
 O
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLY A:134 A:132 19.0 0.253 -72.2 157.4 19.0 0.253 0.0 HOH
 2.970
 O
 O
GLY B:134 C:132 18.0 0.24 -74.4 159.5 18.0 0.24 0.0 HOH
 2.840
 O
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLY A:134 A:132 19.0 0.253 -89.7 169.7 19.0 0.253 0.0
GLY B:134 B:132 18.0 0.24 -86.4 170.6 18.0 0.24 0.0
GLY C:134 C:132 18.0 0.24 -88.0 169.9 NA NA NA
GLY D:134 D:132 19.0 0.253 -86.6 170.2 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLY A:132 A:132 20.0 0.267 -90.2 160.8 20.0 0.267 0.0 HOH
 2.839
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLY A:143 A:132 19.0 0.253 -94.8 166.6 19.0 0.253 0.0 HOH
 2.738
 O
 O
GLY B:143 B:132 20.0 0.267 -89.1 166.0 20.0 0.267 0.0 HOH
 2.944
 O
 O
GLY C:143 E:132 19.0 0.253 -91.8 168.7 NA NA NA
GLY D:143 G:132 22.0 0.293 -82.6 169.0 NA NA NA
GLY E:143 M:132 20.0 0.267 -87.1 160.8 NA NA NA
GLY F:143 N:132 20.0 0.267 -85.5 160.8 NA NA NA
GLY G:143 S:132 19.0 0.253 -88.1 157.1 NA NA NA
GLY H:143 T:132 20.0 0.267 -88.6 165.4 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLY A:134 A:132 20.0 0.267 -73.3 164.9 20.0 0.267 0.0 HOH
 7.874
 O
 O
GLY B:134 C:132 19.0 0.253 -81.5 150.0 19.0 0.253 0.0 HOH
 7.551
 O
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLY A:132 A:132 11.0 0.147 -80.2 120.2 11.0 0.147 0.0 HOH
 7.860
 O
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLY A:132 A:132 17.0 0.227 -78.8 154.6 17.0 0.227 0.0 HOH
 5.496
 O
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLY A:127 A:132 18.0 0.24 -85.3 164.2 18.0 0.24 0.0 HOH
 2.553
 HA3
 O
GLY B:127 B:132 18.0 0.24 -74.9 158.9 18.0 0.24 0.0 HOH
 2.758
 HA2
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLY A:127 A:132 18.0 0.24 -90.8 163.9 18.0 0.24 0.0 HOH
 2.643
 HA3
 O
GLY B:127 B:132 18.0 0.24 -77.6 160.7 18.0 0.24 0.0 HOH
 2.741
 HA2
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLY A:132 A:132 21.0 0.28 -82.6 163.1 21.0 0.28 0.0 HOH
 2.865
 O
 O
GLY B:132 B:132 19.0 0.253 -86.0 160.8 19.0 0.253 0.0 HOH
 2.700
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLY A:132 A:132 18.0 0.24 -81.6 159.6