Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241810111 . C A CCDS2543.1:NM_000030.2:c.409Cag>Aag_NP_000021.1:p.137Q>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLN A:137 A:137 68.0 NA H -61.3 -72.8 68.0 NA NA HOH
 8.708
 C
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLN A:137 A:137 52.0 NA H -70.7 -56.8 52.0 NA NA
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:137 A:137 125.0 0.694 H -69.0 -52.9 125.0 0.694 0.0 HOH
 3.239
 CB
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:137 A:137 63.0 NA H -53.5 -57.4 63.0 NA NA HOH
 5.224
 N
 O
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLN A:139 A:137 58.0 NA H -57.9 -44.1 58.0 NA NA HOH
 2.936
 N
 O
GLN C:139 C:137 131.0 0.728 H -65.4 -49.4 131.0 0.728 0.0 HOH
 2.660
 OE1
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLN A:137 A:137 61.0 NA H -73.7 -40.6 61.0 NA NA HOH
 2.325
 CB
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLN A:139 A:137 143.0 0.794 H -65.2 -47.9 143.0 0.794 0.0 HOH
 2.994
 NE2
 O
GLN B:139 C:137 122.0 0.678 H -59.3 -52.2 122.0 0.678 0.0 HOH
 3.650
 CA
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLN A:139 A:137 63.0 NA H -66.9 -49.5 63.0 NA NA
GLN B:139 B:137 127.0 0.706 H -70.3 -48.7 127.0 0.706 0.0
GLN C:139 C:137 136.0 0.756 H -68.6 -50.8 NA NA NA
GLN D:139 D:137 145.0 0.806 H -68.1 -50.2 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLN A:137 A:137 63.0 NA H -63.1 -66.8 63.0 NA NA GOL
HOH
 3.533
7.560
 CB
N
 O2
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLN A:148 A:137 98.0 0.544 H -63.7 -45.4 98.0 0.544 0.0 HOH
 2.260
 OE1
 O
GLN B:148 B:137 110.0 0.611 H -62.9 -39.2 110.0 0.611 0.0 HOH
 2.401
 OE1
 O
GLN C:148 E:137 86.0 NA H -62.1 -47.6 NA NA NA
GLN D:148 G:137 107.0 0.594 H -61.4 -40.0 NA NA NA
GLN E:148 M:137 137.0 0.761 H -67.3 -38.4 NA NA NA
GLN F:148 N:137 122.0 0.678 H -60.9 -46.0 NA NA NA
GLN G:148 S:137 129.0 0.717 H -59.4 -43.1 NA NA NA
GLN H:148 T:137 131.0 0.728 H -66.9 -32.6 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLN A:139 A:137 130.0 0.722 H -65.2 -49.8 130.0 0.722 0.0
GLN B:139 C:137 119.0 0.661 H -60.4 -59.7 119.0 0.661 0.0 HOH
 4.972
 N
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLN A:137 A:137 159.0 0.883 H -68.0 -41.3 159.0 0.883 0.0 HOH
 2.517
 O
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLN A:137 A:137 100.0 0.556 H -73.5 -47.6 100.0 0.556 0.0 HOH
 7.136
 OE1
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLN A:132 A:137 147.0 0.817 H -61.4 -44.7 147.0 0.817 0.0 HOH
 2.397
 HE22
 O
GLN B:132 B:137 135.0 0.75 H -67.3 -37.7 135.0 0.75 0.0 HOH
 2.271
 H
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLN A:132 A:137 146.0 0.811 H -61.6 -48.0 146.0 0.811 0.0 HOH
 2.104
 HE22
 O
GLN B:132 B:137 137.0 0.761 H -68.2 -36.5 137.0 0.761 0.0 HOH
 2.257
 H
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLN A:137 A:137 144.0 0.8 H -60.9 -43.3 144.0 0.8 0.0 HOH
 2.823
 OE1
 O
GLN B:137 B:137 160.0 0.889 H -65.7 -41.4 160.0 0.889 0.0 GOL
HOH
 4.739
2.895
 N
N
 O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLN A:137 A:137 132.0 0.733 H -63.7 -49.1