Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241810811 . G A CCDS2543.1:NM_000030.2:c.469Gag>Aag_NP_000021.1:p.157E>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLU A:157 A:157 0.0 0.0 E -75.1 91.8 0.0 0.0 0.0 PLP
AOA
GOL
HOH
 4.959
7.054
9.411
4.520
 CA
OE2
OE1
N
 C2A
O2
O3
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLU A:157 A:157 2.0 0.011 E -94.8 91.4 2.0 0.011 0.0 PLP
HOH
 5.130
4.547
 CA
N
 C2A
O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:157 A:157 0.0 0.0 E -81.5 88.1 0.0 0.0 0.0 PMP
HOH
 5.115
5.216
 CA
N
 C2A
O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:157 A:157 0.0 0.0 E -79.4 91.4 0.0 0.0 0.0 PLP
 5.364
 CA
 C2A
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLU A:159 A:157 0.0 0.0 E -85.5 97.0 0.0 0.0 0.0 HOH
 2.395
 OE1
 O
GLU C:159 C:157 1.0 0.005 E -78.1 85.2 1.0 0.005 0.0 HOH
 2.490
 OE1
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLU A:157 A:157 1.0 0.005 E -83.2 89.1 1.0 0.005 0.0 PLP
DIO
HOH
 5.138
8.874
2.975
 CA
C
OE1
 C2A
O1'
O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLU A:159 A:157 1.0 0.005 E -77.6 86.8 1.0 0.005 0.0 BME
HOH
 9.429
2.518
 N
OE1
 O1
O
GLU B:159 C:157 2.0 0.011 E -80.8 91.4 2.0 0.011 0.0 HOH
 2.685
 OE2
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLU A:159 A:157 1.0 0.005 E -90.4 100.0 1.0 0.005 0.0 GOL
 8.772
 C
 O1
GLU B:159 B:157 1.0 0.005 E -86.8 98.4 1.0 0.005 0.0 GOL
 9.294
 C
 C3
GLU C:159 C:157 2.0 0.011 E -89.1 99.4 NA NA NA
GLU D:159 D:157 2.0 0.011 E -89.3 98.4 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLU A:157 A:157 1.0 0.005 -72.1 92.2 1.0 0.005 0.0 AOA
GOL
HOH
 8.113
9.391
4.382
 C
OE1
CG
 O2
O3
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLU A:168 A:157 1.0 0.005 E -83.6 90.4 1.0 0.005 0.0 PLP
HOH
 5.123
2.680
 CA
OE1
 C2A
O
GLU B:168 B:157 1.0 0.005 E -86.8 90.2 1.0 0.005 0.0 PLP
HOH
 5.009
3.083
 CA
OE1
 C2A
O
GLU C:168 E:157 1.0 0.005 E -82.0 90.2 NA NA NA
GLU D:168 G:157 1.0 0.005 E -80.9 90.8 NA NA NA
GLU E:168 M:157 1.0 0.005 E -81.9 89.3 NA NA NA
GLU F:168 N:157 1.0 0.005 E -82.2 85.8 NA NA NA
GLU G:168 S:157 1.0 0.005 E -83.1 91.1 NA NA NA
GLU H:168 T:157 1.0 0.005 E -87.0 88.9 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLU A:159 A:157 1.0 0.005 E -93.1 90.2 1.0 0.005 0.0 BME
HOH
 6.535
2.446
 C
OE1
 O1
O
GLU B:159 C:157 0.0 0.0 E -92.5 87.2 0.0 0.0 0.0 HOH
 2.297
 OE1
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLU A:157 A:157 1.0 0.005 E -83.9 86.8 1.0 0.005 0.0 PLP
GOL
HOH
 5.036
7.960
3.175
 CA
C
OE2
 C2A
O2
O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLU A:157 A:157 0.0 0.0 E -74.4 90.8 0.0 0.0 0.0 PLP
HOH
 5.132
2.776
 CA
OE2
 C2A
O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLU A:152 A:157 1.0 0.005 E -82.4 89.3 1.0 0.005 0.0 PLP
HOH
 3.706
2.622
 HA
OE1
 H2A3
O
GLU B:152 B:157 1.0 0.005 E -85.4 86.2 1.0 0.005 0.0 PLP
HOH
 3.721
2.559
 HA
OE1
 H2A3
O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLU A:152 A:157 1.0 0.005 E -84.8 88.3 1.0 0.005 0.0 PLR
HOH
 3.819
2.578
 HA
OE1
 H2A3
O
GLU B:152 B:157 1.0 0.005 E -87.2 87.7 1.0 0.005 0.0 PLR
HOH
 3.884
2.549
 HA
OE1
 H2A3
O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLU A:157 A:157 2.0 0.011 E -80.0 94.3 2.0 0.011 0.0 PLP
HOH
 5.199
2.432
 CA
OE2
 C2A
O
GLU B:157 B:157 1.0 0.005 E -80.3 93.2 1.0 0.005 0.0 PLP
HOH
 5.155
2.516
 CA
OE2
 C2A
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLU A:157 A:157 1.0 0.005 E -79.0 84.0