Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 241812456 | . | G | A | CCDS2543.1:NM_000030.2:c.585atG>atA_NP_000021.1:p.195M>I | Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1h0c | 1 | P21549 | 100.0 | 0.0 |
X-RAY |
2003-06-12 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -55.1 | -62.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.527 |
CG |
O |
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5og0 | 1 | P21549 | 100.0 | 0.0 |
X-RAY |
2017-09-27 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -61.9 | -50.8 | 0.0 | 0.0 | 0.0 |
HOH |
6.115 |
N |
O |
||
6rv0 | 1 | P21549 | 100.0 | 0.0 |
X-RAY |
2020-04-08 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -59.1 | -61.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.431 |
N |
O |
||
6rv1 | 1 | P21549 | 100.0 | 0.0 |
X-RAY |
2020-04-08 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -52.8 | -62.7 | 0.0 | 0.0 | 0.0 | ||||||
3r9a | 1 | P21549 | 100.0 | 0.0 |
X-RAY |
2011-05-11 | MET | A:197 | A:195 | 0.0 | 0.0 | T | -54.7 | -54.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.357 |
CE |
O |
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MET | C:197 | C:195 | 0.0 | 0.0 | T | -53.4 | -62.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.705 |
N |
O |
|||||||||
5ofy | 1 | P21549 | 99.74 | 0.0 |
X-RAY |
2017-09-27 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -56.3 | -61.2 | 0.0 | 0.0 | 0.0 |
HOH |
6.362 |
N |
O |
||
4kyo | 1 | P21549 | 99.74 | 0.0 |
X-RAY |
2014-11-19 | MET | A:197 | A:195 | 0.0 | 0.0 | T | -54.9 | -55.4 | 0.0 | 0.0 | 0.0 |
BME HOH |
8.779 3.530 |
N CE |
C2 O |
||
MET | B:197 | C:195 | 0.0 | 0.0 | T | -57.2 | -56.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.635 |
CE |
O |
|||||||||
4i8a | 1 | P21549 | 99.74 | 0.0 |
X-RAY |
2013-05-01 | MET | A:197 | A:195 | 0.0 | 0.0 | H | -59.2 | -58.0 | 0.0 | 0.0 | 0.0 | ||||||
MET | B:197 | B:195 | 0.0 | 0.0 | H | -59.7 | -56.7 | 0.0 | 0.0 | 0.0 | |||||||||||||
MET | C:197 | C:195 | 0.0 | 0.0 | H | -59.0 | -57.7 | NA | NA | NA | |||||||||||||
MET | D:197 | D:195 | 0.0 | 0.0 | H | -59.9 | -57.4 | NA | NA | NA | |||||||||||||
1j04 | 1 | P21549 | 99.74 | 0.0 |
X-RAY |
2003-11-11 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -42.1 | -73.9 | 0.0 | 0.0 | 0.0 |
GOL HOH |
6.575 3.661 |
O CE |
C2 O |
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5luc | 1 | P21549 | 99.74 | 0.0 |
X-RAY |
2017-09-20 | MET | A:206 | A:195 | 0.0 | 0.0 | T | -57.9 | -55.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.618 |
CE |
O |
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MET | B:206 | B:195 | 0.0 | 0.0 | T | -57.5 | -55.4 | 0.0 | 0.0 | 0.0 |
HOH |
3.586 |
CE |
O |
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MET | C:206 | E:195 | 0.0 | 0.0 | T | -52.6 | -56.7 | NA | NA | NA | |||||||||||||
MET | D:206 | G:195 | 0.0 | 0.0 | T | -60.3 | -53.9 | NA | NA | NA | |||||||||||||
MET | E:206 | M:195 | 0.0 | 0.0 | T | -60.6 | -53.2 | NA | NA | NA | |||||||||||||
MET | F:206 | N:195 | 0.0 | 0.0 | T | -58.6 | -53.9 | NA | NA | NA | |||||||||||||
MET | G:206 | S:195 | 0.0 | 0.0 | T | -56.9 | -51.6 | NA | NA | NA | |||||||||||||
MET | H:206 | T:195 | 0.0 | 0.0 | T | -60.3 | -50.6 | NA | NA | NA | |||||||||||||
4kxk | 1 | P21549 | 99.49 | 0.0 |
X-RAY |
2014-11-19 | MET | A:197 | A:195 | 0.0 | 0.0 | T | -51.6 | -54.1 | 0.0 | 0.0 | 0.0 |
HOH |
8.302 |
O |
O |
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MET | B:197 | C:195 | 0.0 | 0.0 | T | -48.2 | -57.6 | 0.0 | 0.0 | 0.0 |
HOH |
7.558 |
CE |
O |
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4cbr | 1 | P21549 | 99.23 | 0.0 |
X-RAY |
2014-07-09 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -48.5 | -52.5 | 0.0 | 0.0 | 0.0 |
HOH |
6.076 |
CG |
O |
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4cbs | 1 | P21549 | 98.72 | 0.0 |
X-RAY |
2014-07-09 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -54.7 | -66.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.327 |
N |
O |
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5f9s | 1 | P21549 | 100.0 | 0.0 |
X-RAY |
2016-12-21 | MET | A:190 | A:195 | 0.0 | 0.0 | T | -58.0 | -54.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.891 |
HG2 |
O |
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MET | B:190 | B:195 | 0.0 | 0.0 | T | -61.6 | -55.1 | 0.0 | 0.0 | 0.0 |
HOH |
2.829 |
HE2 |
O |
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5hhy | 1 | P21549 | 100.0 | 0.0 |
X-RAY |
2017-01-25 | MET | A:190 | A:195 | 0.0 | 0.0 | T | -57.9 | -53.7 | 0.0 | 0.0 | 0.0 |
HOH |
2.675 |
HE2 |
O |
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MET | B:190 | B:195 | 0.0 | 0.0 | T | -60.0 | -56.0 | 0.0 | 0.0 | 0.0 |
HOH |
2.741 |
HE2 |
O |
|||||||||
2yob | 1 | P21549 | 99.74 | 0.0 |
X-RAY |
2013-10-30 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -55.8 | -59.0 | 0.0 | 0.0 | 0.0 |
GOL HOH |
5.410 3.563 |
O CE |
O3 O |
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MET | B:195 | B:195 | 0.0 | 0.0 | T | -58.7 | -53.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.722 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p21549-f1 | 1 | P21549 | 100.0 | 0.0 | MET | A:195 | A:195 | 0.0 | 0.0 | T | -50.3 | -54.3 |