Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241813431 . T A CCDS2543.1:NM_000030.2:c.632cTg>cAg_NP_000021.1:p.211L>Q Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 LEU A:211 A:211 10.0 0.059 T -75.3 -17.1 10.0 0.059 0.0 GOL
HOH
 7.385
2.949
 O
O
 O3
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 LEU A:211 A:211 10.0 0.059 T -78.8 -16.9 10.0 0.059 0.0 HOH
 2.769
 O
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LEU A:211 A:211 7.0 0.041 T -88.0 -17.9 7.0 0.041 0.0 HOH
 6.615
 C
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LEU A:211 A:211 19.0 NA T -88.3 -20.0 19.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 LEU A:213 A:211 8.0 0.047 T -74.2 -24.0 8.0 0.047 0.0 HOH
 2.735
 N
 O
LEU C:213 C:211 7.0 0.041 T -76.6 -25.1 7.0 0.041 0.0 HOH
 2.466
 O
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 LEU A:211 A:211 8.0 0.047 T -81.3 -8.7 8.0 0.047 0.0 HOH
 3.106
 N
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 LEU A:213 A:211 11.0 0.065 T -70.4 -21.9 11.0 0.065 0.0 HOH
 2.737
 O
 O
LEU B:213 C:211 9.0 0.053 T -68.4 -17.8 9.0 0.053 0.0 HOH
 2.706
 O
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 LEU A:213 A:211 4.0 0.024 S -103.6 164.6 4.0 0.024 0.0
LEU B:213 B:211 5.0 0.029 S -102.6 166.2 5.0 0.029 0.0
LEU C:213 C:211 4.0 0.024 S -102.5 165.0 NA NA NA
LEU D:213 D:211 4.0 0.024 S -102.8 167.2 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 LEU A:211 A:211 11.0 0.065 T -77.7 -20.7 11.0 0.065 0.0 GOL
HOH
 7.334
2.968
 O
N
 O3
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 LEU A:222 A:211 8.0 0.047 T -70.6 -19.6 8.0 0.047 0.0 HOH
 2.776
 O
 O
LEU B:222 B:211 9.0 0.053 T -69.9 -21.3 9.0 0.053 0.0 HOH
 2.786
 O
 O
LEU C:222 E:211 8.0 0.047 T -71.6 -18.6 NA NA NA
LEU D:222 G:211 10.0 0.059 T -70.8 -19.8 NA NA NA
LEU E:222 M:211 10.0 0.059 T -72.3 -19.6 NA NA NA
LEU F:222 N:211 10.0 0.059 T -71.9 -18.4 NA NA NA
LEU G:222 S:211 9.0 0.053 T -71.4 -20.2 NA NA NA
LEU H:222 T:211 6.0 0.035 T -70.0 -19.3 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 LEU A:213 A:211 12.0 0.071 T -74.4 -14.2 12.0 0.071 0.0 HOH
 9.320
 N
 O
LEU B:213 C:211 9.0 0.053 T -69.1 -12.5 9.0 0.053 0.0 HOH
 9.967
 O
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 LEU A:211 A:211 8.0 0.047 T -79.5 -12.1 8.0 0.047 0.0 HOH
 2.919
 O
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 LEU A:211 A:211 12.0 0.071 T -72.6 -17.5 12.0 0.071 0.0 HOH
 3.010
 CB
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 LEU A:206 A:211 7.0 0.041 T -74.4 -18.0 7.0 0.041 0.0 HOH
 2.092
 H
 O
LEU B:206 B:211 10.0 0.059 T -73.0 -17.4 10.0 0.059 0.0 HOH
 2.163
 H
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 LEU A:206 A:211 7.0 0.041 T -74.4 -18.8 7.0 0.041 0.0 HOH
 2.123
 H
 O
LEU B:206 B:211 10.0 0.059 T -74.9 -16.6 10.0 0.059 0.0 HOH
 2.133
 H
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 LEU A:211 A:211 9.0 0.053 T -70.0 -23.4 9.0 0.053 0.0 HOH
 2.598
 O
 O
LEU B:211 B:211 10.0 0.059 T -69.0 -22.8 10.0 0.059 0.0 HOH
 2.778
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 LEU A:211 A:211 8.0 0.047 T -75.7 -14.8