Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241813434 . A C CCDS2543.1:NM_000030.2:c.635aAc>aCc_NP_000021.1:p.212N>T Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 ASN A:212 A:212 11.0 0.069 60.2 40.2 11.0 0.069 0.0 GOL
HOH
 5.006
3.156
 OD1
OD1
 O3
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 ASN A:212 A:212 10.0 0.062 55.3 29.9 10.0 0.062 0.0 HOH
 4.556
 OD1
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ASN A:212 A:212 9.0 0.056 68.6 23.5 9.0 0.056 0.0 HOH
 4.369
 C
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ASN A:212 A:212 11.0 0.069 66.8 30.4 11.0 0.069 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 ASN A:214 A:212 9.0 0.056 66.5 23.4 9.0 0.056 0.0 HOH
 2.779
 OD1
 O
ASN C:214 C:212 9.0 0.056 67.8 27.0 9.0 0.056 0.0 HOH
 2.714
 OD1
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 ASN A:212 A:212 10.0 0.062 54.7 30.8 10.0 0.062 0.0 HOH
 5.257
 N
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 ASN A:214 A:212 11.0 0.069 59.1 24.3 11.0 0.069 0.0 HOH
 2.646
 OD1
 O
ASN B:214 C:212 12.0 0.075 53.9 30.0 12.0 0.075 0.0 BME
HOH
 9.467
2.617
 O
OD1
 S2
O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 ASN A:214 A:212 18.0 0.113 S -80.7 59.0 18.0 0.113 0.0
ASN B:214 B:212 18.0 0.113 S -81.2 58.9 18.0 0.113 0.0
ASN C:214 C:212 18.0 0.113 S -79.9 58.7 NA NA NA
ASN D:214 D:212 18.0 0.113 S -80.5 58.2 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 ASN A:212 A:212 9.0 0.056 65.1 26.6 9.0 0.056 0.0 GOL
HOH
 5.275
2.640
 OD1
OD1
 O3
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 ASN A:223 A:212 10.0 0.062 62.2 30.8 10.0 0.062 0.0 HOH
 2.754
 OD1
 O
ASN B:223 B:212 10.0 0.062 62.1 30.2 10.0 0.062 0.0 HOH
 2.838
 OD1
 O
ASN C:223 E:212 10.0 0.062 61.0 31.2 NA NA NA
ASN D:223 G:212 9.0 0.056 59.6 29.4 NA NA NA
ASN E:223 M:212 10.0 0.062 61.5 31.6 NA NA NA
ASN F:223 N:212 10.0 0.062 63.3 31.0 NA NA NA
ASN G:223 S:212 11.0 0.069 63.6 28.2 NA NA NA
ASN H:223 T:212 11.0 0.069 60.7 31.5 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 ASN A:214 A:212 11.0 0.069 60.9 30.3 11.0 0.069 0.0 HOH
 6.427
 ND2
 O
ASN B:214 C:212 11.0 0.069 52.9 26.1 11.0 0.069 0.0 HOH
 8.912
 OD1
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 ASN A:212 A:212 11.0 0.069 54.3 25.8 11.0 0.069 0.0 HOH
 3.194
 OD1
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 ASN A:212 A:212 11.0 0.069 55.0 31.1 11.0 0.069 0.0 HOH
 2.181
 OD1
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 ASN A:207 A:212 10.0 0.062 61.7 24.6 10.0 0.062 0.0 HOH
 2.718
 OD1
 O
ASN B:207 B:212 12.0 0.075 62.8 28.7 12.0 0.075 0.0 HOH
 2.977
 OD1
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 ASN A:207 A:212 10.0 0.062 62.0 24.5 10.0 0.062 0.0 HOH
 2.719
 OD1
 O
ASN B:207 B:212 11.0 0.069 59.7 31.2 11.0 0.069 0.0 HOH
 2.856
 OD1
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 ASN A:212 A:212 10.0 0.062 64.0 29.2 10.0 0.062 0.0 HOH
 2.784
 OD1
 O
ASN B:212 B:212 11.0 0.069 60.1 28.6 11.0 0.069 0.0 HOH
 2.766
 OD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 ASN A:212 A:212 10.0 0.062 53.8 26.9