Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241815416 . G A CCDS2543.1:NM_000030.2:c.841Gaa>Aaa_NP_000021.1:p.281E>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLU A:281 A:281 138.0 0.726 H -73.3 -40.7 105.0 0.553 0.173 A:P21549:0.174
 GOL
HOH
 6.904
2.736
 OE1
OE2
 C1
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLU A:281 A:281 138.0 0.726 H -62.4 -44.1 100.0 0.526 0.2 A:P21549:0.2
 HOH
 2.571
 OE2
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:281 A:281 150.0 0.789 H -55.2 -46.8 115.0 0.605 0.184 A:P21549:0.184
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:281 A:281 84.0 NA H -73.0 -44.3 70.0 NA NA A:P21549:NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLU A:283 A:281 157.0 0.826 H -74.7 -39.0 137.0 0.721 0.105 C:P21549:0.105
 HOH
 2.551
 OE1
 O
GLU C:283 C:281 133.0 0.7 H -65.3 -47.1 102.0 0.537 0.163 A:P21549:0.163
 HOH
 2.668
 OE2
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLU A:281 A:281 137.0 0.721 H -65.3 -44.0 100.0 0.526 0.195 A:P21549:0.195
 HOH
 8.183
 OE1
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLU A:283 A:281 134.0 0.705 H -59.2 -47.2 102.0 0.537 0.168 B:P21549:0.168
 HOH
 2.854
 OE1
 O
GLU B:283 C:281 132.0 0.695 H -63.5 -49.9 102.0 0.537 0.158 A:P21549:0.158
 HOH
 2.767
 OE1
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLU A:283 A:281 133.0 0.7 H -74.2 -50.3 103.0 0.542 0.158 B:P21549:0.158
GLU B:283 B:281 135.0 0.711 H -75.0 -50.4 106.0 0.558 0.153 A:P21549:0.153
GLU C:283 C:281 136.0 0.716 H -77.0 -49.2 NA NA NA
GLU D:283 D:281 136.0 0.716 H -74.6 -49.8 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLU A:281 A:281 133.0 0.7 H -67.2 -44.1 133.0 0.7 0.0 GOL
HOH
 6.553
2.602
 OE1
OE2
 C1
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLU A:292 A:281 148.0 0.779 H -63.2 -50.8 128.0 0.674 0.105 B:P21549:0.105
 HOH
 2.727
 OE1
 O
GLU B:292 B:281 134.0 0.705 H -67.2 -43.8 102.0 0.537 0.168 A:P21549:0.168
 HOH
 2.487
 OE2
 O
GLU C:292 E:281 134.0 0.705 H -71.1 -44.9 NA NA NA
GLU D:292 G:281 135.0 0.711 H -73.5 -43.0 NA NA NA
GLU E:292 M:281 133.0 0.7 H -71.2 -43.3 NA NA NA
GLU F:292 N:281 130.0 0.684 H -69.1 -42.0 NA NA NA
GLU G:292 S:281 133.0 0.7 H -64.8 -41.1 NA NA NA
GLU H:292 T:281 130.0 0.684 H -66.4 -43.5 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLU A:283 A:281 138.0 0.726 H -60.9 -40.8 104.0 0.547 0.179 B:P21549:0.179
 HOH
 7.317
 O
 O
GLU B:283 C:281 136.0 0.716 H -72.0 -45.7 107.0 0.563 0.153 A:P21549:0.153
 HOH
 8.252
 OE2
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLU A:281 A:281 129.0 0.679 H -71.1 -47.2 96.0 0.505 0.174 A:P21549:0.174
 HOH
 2.462
 OE2
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLU A:281 A:281 137.0 0.721 H -71.1 -40.8 102.0 0.537 0.184 A:P21549:0.184
 HOH
 2.292
 OE2
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLU A:276 A:281 137.0 0.721 H -66.7 -42.5 105.0 0.553 0.168 B:P21549:0.168
 HOH
 2.384
 OE2
 O
GLU B:276 B:281 127.0 0.668 H -66.5 -49.2 98.0 0.516 0.152 A:P21549:0.153
 HOH
 2.631
 OE1
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLU A:276 A:281 135.0 0.711 H -67.5 -42.7 102.0 0.537 0.174 B:P21549:0.174
 HOH
 2.353
 OE2
 O
GLU B:276 B:281 127.0 0.668 H -66.9 -48.1 98.0 0.516 0.152 A:P21549:0.153
 HOH
 2.607
 HG2
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLU A:281 A:281 132.0 0.695 H -73.7 -39.5 99.0 0.521 0.174 B:P21549:0.174
 HOH
 2.588
 OE1
 O
GLU B:281 B:281 128.0 0.674 H -68.9 -42.2 100.0 0.526 0.148 A:P21549:0.147
 HOH
 2.506
 OE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLU A:281 A:281 131.0 0.689 H -64.5 -41.7