Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241816994 . C A CCDS2543.1:NM_000030.2:c.887gCg>gAg_NP_000021.1:p.296A>E Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 ALA A:296 A:296 60.0 0.522 H -63.8 -48.6 60.0 0.522 0.0 GOL
HOH
 7.864
3.737
 N
O
 O3
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 ALA A:296 A:296 58.0 0.504 H -67.0 -52.8 58.0 0.504 0.0 HOH
 6.952
 N
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ALA A:296 A:296 59.0 0.513 H -55.4 -52.9 59.0 0.513 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ALA A:296 A:296 60.0 0.522 H -45.7 -56.5 60.0 0.522 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 ALA A:298 A:296 60.0 0.522 H -61.0 -39.8 60.0 0.522 0.0 HOH
 2.757
 O
 O
ALA C:298 C:296 62.0 0.539 H -64.3 -33.4 62.0 0.539 0.0 HOH
 3.305
 CA
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 ALA A:296 A:296 61.0 0.53 H -68.0 -47.5 61.0 0.53 0.0
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 ALA A:298 A:296 61.0 0.53 H -59.0 -39.1 61.0 0.53 0.0 BME
HOH
 6.422
2.560
 O
O
 C1
O
ALA B:298 C:296 62.0 0.539 H -63.1 -41.0 62.0 0.539 0.0 HOH
 3.624
 C
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 ALA A:298 A:296 57.0 0.496 H -51.1 -49.6 57.0 0.496 0.0
ALA B:298 B:296 57.0 0.496 H -52.4 -49.4 57.0 0.496 0.0
ALA C:298 C:296 58.0 0.504 H -52.8 -48.5 NA NA NA
ALA D:298 D:296 57.0 0.496 H -51.6 -48.9 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 ALA A:296 A:296 57.0 0.496 H -66.2 -53.9 57.0 0.496 0.0 GOL
HOH
 8.193
5.404
 N
CB
 O3
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 ALA A:307 A:296 64.0 0.557 H -64.6 -36.9 64.0 0.557 0.0 HOH
 2.652
 O
 O
ALA B:307 B:296 64.0 0.557 H -63.1 -38.7 64.0 0.557 0.0 HOH
 2.582
 O
 O
ALA C:307 E:296 63.0 0.548 H -62.3 -40.2 NA NA NA
ALA D:307 G:296 63.0 0.548 H -66.3 -36.6 NA NA NA
ALA E:307 M:296 62.0 0.539 H -62.2 -37.9 NA NA NA
ALA F:307 N:296 63.0 0.548 H -58.1 -40.9 NA NA NA
ALA G:307 S:296 62.0 0.539 H -55.0 -42.1 NA NA NA
ALA H:307 T:296 63.0 0.548 H -60.9 -39.0 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 ALA A:298 A:296 56.0 0.487 H -59.2 -44.3 56.0 0.487 0.0
ALA B:298 C:296 56.0 0.487 H -58.5 -45.8 56.0 0.487 0.0
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 ALA A:296 A:296 60.0 0.522 H -62.2 -46.2 60.0 0.522 0.0 HOH
 3.502
 N
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 ALA A:296 A:296 63.0 0.548 H -59.6 -54.5 63.0 0.548 0.0 HOH
 7.318
 N
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 ALA A:291 A:296 60.0 0.522 H -58.4 -42.8 60.0 0.522 0.0 HOH
 2.714
 O
 O
ALA B:291 B:296 61.0 0.53 H -54.7 -44.6 61.0 0.53 0.0 HOH
 2.640
 O
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 ALA A:291 A:296 60.0 0.522 H -60.7 -42.5 60.0 0.522 0.0 HOH
 2.584
 O
 O
ALA B:291 B:296 62.0 0.539 H -55.1 -42.8 62.0 0.539 0.0 HOH
 2.677
 O
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 ALA A:296 A:296 63.0 0.548 H -59.1 -41.7 63.0 0.548 0.0 HOH
 3.766
 O
 O
ALA B:296 B:296 62.0 0.539 H -63.2 -38.6 62.0 0.539 0.0 HOH
 2.740
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 ALA A:296 A:296 61.0 0.53 H -60.5 -41.2