Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241816998 . T A CCDS2543.1:NM_000030.2:c.891taT>taA_NP_000021.1:p.297Y>* Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 TYR A:297 A:297 59.0 0.257 H -57.3 -49.1 59.0 0.257 0.0 GOL
HOH
 6.663
3.634
 CD2
OH
 C1
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 TYR A:297 A:297 66.0 0.287 H -52.8 -56.5 66.0 0.287 0.0 HOH
 3.992
 OH
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 TYR A:297 A:297 73.0 0.317 H -50.3 -57.2 73.0 0.317 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 TYR A:297 A:297 98.0 0.426 H -51.3 -55.2 98.0 0.426 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 TYR A:299 A:297 52.0 0.226 H -62.9 -46.5 52.0 0.226 0.0 HOH
 3.965
 OH
 O
TYR C:299 C:297 56.0 0.243 H -70.4 -37.3 56.0 0.243 0.0 HOH
 2.862
 O
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 TYR A:297 A:297 61.0 0.265 H -53.8 -54.4 61.0 0.265 0.0
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 TYR A:299 A:297 65.0 0.283 H -63.7 -49.9 65.0 0.283 0.0 BME
HOH
 3.224
2.982
 CD1
O
 C1
O
TYR B:299 C:297 56.0 0.243 H -62.4 -47.8 56.0 0.243 0.0 HOH
 2.763
 O
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 TYR A:299 A:297 55.0 0.239 H -56.1 -35.4 55.0 0.239 0.0
TYR B:299 B:297 54.0 0.235 H -56.6 -35.5 54.0 0.235 0.0
TYR C:299 C:297 56.0 0.243 H -56.3 -35.9 NA NA NA
TYR D:299 D:297 55.0 0.239 H -55.7 -36.6 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 TYR A:297 A:297 61.0 0.265 H -48.7 -54.0 61.0 0.265 0.0 GOL
HOH
 6.585
3.402
 CD2
OH
 O1
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 TYR A:308 A:297 57.0 0.248 H -65.5 -44.6 57.0 0.248 0.0 HOH
 2.750
 OH
 O
TYR B:308 B:297 57.0 0.248 H -65.4 -41.8 57.0 0.248 0.0 HOH
 2.701
 OH
 O
TYR C:308 E:297 53.0 0.23 H -63.9 -45.1 NA NA NA
TYR D:308 G:297 56.0 0.243 H -63.7 -44.4 NA NA NA
TYR E:308 M:297 57.0 0.248 H -68.3 -42.3 NA NA NA
TYR F:308 N:297 55.0 0.239 H -64.9 -43.7 NA NA NA
TYR G:308 S:297 54.0 0.235 H -67.1 -42.6 NA NA NA
TYR H:308 T:297 56.0 0.243 H -72.9 -39.4 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 TYR A:299 A:297 60.0 0.261 H -61.9 -43.1 60.0 0.261 0.0
TYR B:299 C:297 62.0 0.27 H -54.9 -49.2 62.0 0.27 0.0 HOH
 7.541
 CE2
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 TYR A:297 A:297 54.0 0.235 H -56.2 -50.8 54.0 0.235 0.0 HOH
 3.801
 OH
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 TYR A:297 A:297 57.0 0.248 H -52.6 -47.2 57.0 0.248 0.0 HOH
 5.206
 OH
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 TYR A:292 A:297 68.0 0.296 H -61.3 -45.3 68.0 0.296 0.0 HOH
 2.495
 HD1
 O
TYR B:292 B:297 68.0 0.296 H -64.2 -47.1 68.0 0.296 0.0 HOH
 2.702
 HA
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 TYR A:292 A:297 67.0 0.291 H -60.9 -46.8 67.0 0.291 0.0 HOH
 2.364
 HD1
 O
TYR B:292 B:297 70.0 0.304 H -64.9 -48.7 70.0 0.304 0.0 HOH
 2.655
 HA
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 TYR A:297 A:297 47.0 0.204 H -65.0 -37.5 47.0 0.204 0.0 HOH
 2.882
 O
 O
TYR B:297 B:297 48.0 0.209 H -64.2 -47.3 48.0 0.209 0.0 HOH
 2.848
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 TYR A:297 A:297 51.0 0.222 H -63.5 -45.4