Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241817014 . C A CCDS2543.1:NM_000030.2:c.907Cag>Aag_NP_000021.1:p.303Q>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLN A:303 A:303 106.0 0.589 H -61.9 -32.0 106.0 0.589 0.0 HOH
 7.531
 OE1
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLN A:303 A:303 102.0 0.567 H -67.8 -30.6 102.0 0.567 0.0
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:303 A:303 99.0 0.55 H -63.5 -39.5 99.0 0.55 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:303 A:303 105.0 0.583 H -49.8 -51.2 105.0 0.583 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLN A:305 A:303 102.0 0.567 H -69.2 -34.5 92.0 0.511 0.056 B:P50542:0.056
 HOH
 2.750
 O
 O
GLN C:305 C:303 105.0 0.583 H -67.1 -30.0 94.0 0.522 0.061 D:P50542:0.061
 HOH
 2.634
 NE2
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLN A:303 A:303 100.0 0.556 H -69.3 -33.1 100.0 0.556 0.0 HOH
 8.851
 CG
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLN A:305 A:303 99.0 0.55 H -70.7 -28.6 85.0 0.472 0.078 C:P50542:0.078
 HOH
 2.786
 NE2
 O
GLN B:305 C:303 101.0 0.561 H -70.2 -38.6 92.0 0.511 0.05 D:P50542:0.05
 HOH
 2.808
 O
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLN A:305 A:303 107.0 0.594 H -57.0 -38.0 107.0 0.594 0.0
GLN B:305 B:303 107.0 0.594 H -58.2 -37.4 107.0 0.594 0.0
GLN C:305 C:303 106.0 0.589 H -56.6 -37.7 NA NA NA
GLN D:305 D:303 107.0 0.594 H -55.9 -37.7 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLN A:303 A:303 105.0 0.583 H -68.7 -27.5 105.0 0.583 0.0 HOH
 5.682
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLN A:314 A:303 100.0 0.556 H -65.0 -33.5 100.0 0.556 0.0 HOH
 2.750
 OE1
 O
GLN B:314 B:303 101.0 0.561 H -66.8 -34.6 101.0 0.561 0.0 HOH
 2.806
 OE1
 O
GLN C:314 E:303 101.0 0.561 H -68.5 -29.5 NA NA NA
GLN D:314 G:303 98.0 0.544 H -65.7 -36.4 NA NA NA
GLN E:314 M:303 103.0 0.572 H -67.0 -33.8 NA NA NA
GLN F:314 N:303 101.0 0.561 H -66.6 -39.1 NA NA NA
GLN G:314 S:303 100.0 0.556 H -68.4 -34.2 NA NA NA
GLN H:314 T:303 101.0 0.561 H -63.3 -33.0 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLN A:305 A:303 91.0 0.506 H -68.8 -34.9 81.0 0.45 0.056 C:P50542:0.056
GLN B:305 C:303 98.0 0.544 H -72.0 -32.5 90.0 0.5 0.044 D:P50542:0.044
 HOH
 2.851
 NE2
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLN A:303 A:303 104.0 0.578 H -63.1 -34.7 104.0 0.578 0.0 HOH
 2.428
 NE2
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLN A:303 A:303 103.0 0.572 H -65.0 -33.9 103.0 0.572 0.0
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLN A:298 A:303 97.0 0.539 H -62.9 -36.2 97.0 0.539 0.0 HOH
 2.150
 HE22
 O
GLN B:298 B:303 96.0 0.533 H -73.1 -28.1 96.0 0.533 0.0 HOH
 1.897
 HE21
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLN A:298 A:303 96.0 0.533 H -63.0 -37.9 96.0 0.533 0.0 HOH
 2.221
 HE21
 O
GLN B:298 B:303 98.0 0.544 H -69.9 -32.4 98.0 0.544 0.0 HOH
 1.919
 HE21
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLN A:303 A:303 93.0 0.517 H -63.7 -31.8 93.0 0.517 0.0 HOH
 3.015
 NE2
 O
GLN B:303 B:303 103.0 0.572 H -73.5 -26.2 103.0 0.572 0.0 HOH
 2.958
 NE2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLN A:303 A:303 107.0 0.594 H -63.1 -36.6