Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241817029 . C A CCDS2543.1:NM_000030.2:c.922Cag>Aag_NP_000021.1:p.308Q>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLN A:308 A:308 128.0 0.711 -116.4 146.7 128.0 0.711 0.0 HOH
 6.737
 NE2
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLN A:308 A:308 149.0 0.828 -117.8 130.5 149.0 0.828 0.0
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:308 A:308 142.0 0.789 -115.7 125.1 142.0 0.789 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:308 A:308 78.0 NA -106.7 125.4 78.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLN A:310 A:308 116.0 0.644 -106.8 128.7 116.0 0.644 0.0 HOH
 2.668
 N
 O
GLN C:310 C:308 114.0 0.633 -103.0 134.1 114.0 0.633 0.0 HOH
 2.848
 N
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLN A:308 A:308 63.0 NA -115.1 119.0 63.0 NA NA HOH
 3.151
 O
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLN A:310 A:308 107.0 0.594 -108.4 135.4 107.0 0.594 0.0 HOH
 2.833
 N
 O
GLN B:310 C:308 116.0 0.644 -106.7 132.4 116.0 0.644 0.0 HOH
 2.811
 N
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLN A:310 A:308 120.0 0.667 -84.7 129.4 120.0 0.667 0.0
GLN B:310 B:308 129.0 0.717 -85.4 129.0 129.0 0.717 0.0
GLN C:310 C:308 138.0 0.767 -84.0 129.8 NA NA NA
GLN D:310 D:308 138.0 0.767 -84.0 130.5 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLN A:308 A:308 138.0 0.767 -116.3 155.3 138.0 0.767 0.0 HOH
 9.500
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLN A:319 A:308 82.0 0.456 -117.8 129.7 82.0 0.456 0.0 HOH
 3.038
 NE2
 O
GLN B:319 B:308 107.0 0.594 -117.2 128.6 107.0 0.594 0.0 HOH
 2.758
 N
 O
GLN C:319 E:308 141.0 0.783 -114.5 129.4 NA NA NA
GLN D:319 G:308 116.0 0.644 -118.9 131.6 NA NA NA
GLN E:319 M:308 148.0 0.822 -109.7 132.2 NA NA NA
GLN F:319 N:308 127.0 0.706 -113.1 127.2 NA NA NA
GLN G:319 S:308 136.0 0.756 -111.3 131.0 NA NA NA
GLN H:319 T:308 139.0 0.772 -115.5 127.2 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLN A:310 A:308 118.0 0.656 E -109.7 125.1 118.0 0.656 0.0 HOH
 2.950
 OE1
 O
GLN B:310 C:308 121.0 0.672 -100.3 126.8 121.0 0.672 0.0 HOH
 3.436
 C
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLN A:308 A:308 131.0 0.728 -118.7 123.5 131.0 0.728 0.0 HOH
 2.638
 N
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLN A:308 A:308 130.0 0.722 -115.2 141.2 130.0 0.722 0.0 HOH
 9.331
 O
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLN A:303 A:308 134.0 0.744 E -110.8 132.7 134.0 0.744 0.0 HOH
 1.994
 H
 O
GLN B:303 B:308 116.0 0.644 -107.4 127.0 116.0 0.644 0.0 HOH
 1.949
 H
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLN A:303 A:308 122.0 0.678 -109.5 130.7 122.0 0.678 0.0 HOH
 2.035
 H
 O
GLN B:303 B:308 116.0 0.644 -104.0 127.0 116.0 0.644 0.0 HOH
 2.013
 H
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLN A:308 A:308 118.0 0.656 -109.9 132.4 118.0 0.656 0.0 HOH
 2.786
 N
 O
GLN B:308 B:308 113.0 0.628 -112.2 129.5 113.0 0.628 0.0 HOH
 2.936
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLN A:308 A:308 147.0 0.817 -102.4 128.7