Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241817041 . A C CCDS2543.1:NM_000030.2:c.934Aag>Cag_NP_000021.1:p.312K>Q Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 LYS A:312 A:312 170.0 0.85 -83.4 102.4 170.0 0.85 0.0 HOH
 3.550
 CE
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 LYS A:312 A:312 87.0 NA S -52.6 -60.1 87.0 NA NA HOH
 9.804
 N
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LYS A:312 A:312 103.0 NA -81.8 -38.9 103.0 NA NA
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LYS A:312 A:312 95.0 NA -73.1 -55.9 95.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 LYS A:314 A:312 166.0 0.83 -69.6 -41.0 166.0 0.83 0.0 HOH
 2.819
 N
 O
LYS C:314 C:312 141.0 0.705 -70.8 -46.2 141.0 0.705 0.0 HOH
 2.715
 N
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 LYS A:312 A:312 108.0 NA -62.0 -45.5 108.0 NA NA HOH
 6.086
 CG
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 LYS A:314 A:312 136.0 0.68 -72.4 -38.3 136.0 0.68 0.0 HOH
 2.613
 NZ
 O
LYS B:314 C:312 155.0 0.775 -72.6 -39.7 155.0 0.775 0.0 HOH
 2.920
 NZ
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 LYS A:314 A:312 146.0 0.73 S -61.8 -45.0 146.0 0.73 0.0
LYS B:314 B:312 125.0 NA S -63.5 -45.4 125.0 NA NA
LYS C:314 C:312 119.0 NA S -63.4 -45.9 NA NA NA
LYS D:314 D:312 118.0 NA S -62.2 -46.6 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 LYS A:312 A:312 186.0 0.93 -72.1 -30.7 186.0 0.93 0.0 HOH
 3.359
 N
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 LYS A:323 A:312 109.0 NA -71.9 -34.7 109.0 NA NA HOH
 2.947
 N
 O
LYS B:323 B:312 144.0 0.72 -70.5 -42.0 144.0 0.72 0.0 HOH
 3.123
 N
 O
LYS C:323 E:312 104.0 NA -68.4 -35.6 NA NA NA
LYS D:323 G:312 114.0 0.57 -77.8 -32.3 NA NA NA
LYS E:323 M:312 108.0 NA -73.8 -37.4 NA NA NA
LYS F:323 N:312 156.0 0.78 -69.2 -36.8 NA NA NA
LYS G:323 S:312 103.0 NA -77.0 -33.5 NA NA NA
LYS H:323 T:312 88.0 NA -65.3 -41.9 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 LYS A:314 A:312 160.0 0.8 -76.6 -43.9 160.0 0.8 0.0 HOH
 7.140
 NZ
 O
LYS B:314 C:312 160.0 0.8 -79.5 -42.1 160.0 0.8 0.0 HOH
 6.471
 CG
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 LYS A:312 A:312 157.0 0.785 S -57.8 -59.4 157.0 0.785 0.0 HOH
 5.397
 O
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 LYS A:312 A:312 165.0 0.825 -76.2 -43.5 165.0 0.825 0.0 HOH
 8.368
 N
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 LYS A:307 A:312 153.0 0.765 -81.0 -37.6 153.0 0.765 0.0 HOH
 2.313
 HD3
 O
LYS B:307 B:312 122.0 0.61 -81.4 -30.9 122.0 0.61 0.0 HOH
 2.500
 H
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 LYS A:307 A:312 123.0 0.615 -79.7 -36.0 123.0 0.615 0.0 HOH
 2.328
 HZ3
 O
LYS B:307 B:312 120.0 0.6 -82.1 -32.5 120.0 0.6 0.0 HOH
 2.544
 H
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 LYS A:312 A:312 107.0 0.535 -70.1 -40.5 107.0 0.535 0.0 HOH
 2.692
 N
 O
LYS B:312 B:312 134.0 0.67 -71.4 -43.8 134.0 0.67 0.0 HOH
 2.589
 NZ
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 LYS A:312 A:312 190.0 0.95 -69.9 -46.0