Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241817443 . T A CCDS2543.1:NM_000030.2:c.947cTc>cAc_NP_000021.1:p.316L>H Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 LEU A:316 A:316 27.0 0.159 G -97.3 8.1 27.0 0.159 0.0 HOH
 3.548
 CD2
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 LEU A:316 A:316 30.0 0.176 G -98.7 -5.0 30.0 0.176 0.0 HOH
 4.045
 CA
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LEU A:316 A:316 19.0 NA G -111.1 9.1 19.0 NA NA HOH
 9.955
 CG
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LEU A:316 A:316 21.0 NA G -110.9 5.0 21.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 LEU A:318 A:316 24.0 0.141 G -103.3 9.7 24.0 0.141 0.0 HOH
 3.145
 CD1
 O
LEU C:318 C:316 31.0 0.182 G -104.3 5.4 31.0 0.182 0.0 HOH
 3.738
 CA
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 LEU A:316 A:316 27.0 0.159 G -95.5 5.2 27.0 0.159 0.0
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 LEU A:318 A:316 24.0 0.141 G -108.0 3.8 24.0 0.141 0.0 BME
HOH
 8.245
3.626
 CD2
CG
 O1
O
LEU B:318 C:316 26.0 0.153 G -106.1 10.2 26.0 0.153 0.0 HOH
 3.758
 CD2
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 LEU A:318 A:316 23.0 0.135 G -104.4 26.8 23.0 0.135 0.0
LEU B:318 B:316 22.0 0.129 G -105.2 27.8 22.0 0.129 0.0
LEU C:318 C:316 23.0 0.135 G -106.2 27.3 NA NA NA
LEU D:318 D:316 23.0 0.135 G -104.5 26.2 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 LEU A:316 A:316 26.0 0.153 T -94.9 -15.8 26.0 0.153 0.0 HOH
 3.870
 CD2
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 LEU A:327 A:316 25.0 0.147 G -99.5 5.0 25.0 0.147 0.0 HOH
 2.824
 CD1
 O
LEU B:327 B:316 26.0 0.153 G -105.1 12.3 26.0 0.153 0.0 HOH
 3.660
 CD2
 O
LEU C:327 E:316 28.0 0.165 G -100.0 4.4 NA NA NA
LEU D:327 G:316 29.0 0.171 G -99.2 6.0 NA NA NA
LEU E:327 M:316 24.0 0.141 G -100.2 5.3 NA NA NA
LEU F:327 N:316 24.0 0.141 G -96.9 6.4 NA NA NA
LEU G:327 S:316 24.0 0.141 G -98.4 9.3 NA NA NA
LEU H:327 T:316 26.0 0.153 G -94.0 6.8 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 LEU A:318 A:316 27.0 0.159 G -99.0 7.3 27.0 0.159 0.0 HOH
 5.046
 N
 O
LEU B:318 C:316 27.0 0.159 G -104.8 16.6 27.0 0.159 0.0 HOH
 8.707
 CD2
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 LEU A:316 A:316 20.0 0.118 G -92.9 1.9 20.0 0.118 0.0 HOH
 4.445
 CD2
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 LEU A:316 A:316 26.0 0.153 G -98.0 1.7 26.0 0.153 0.0 HOH
 4.424
 CD2
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 LEU A:311 A:316 24.0 0.141 G -104.4 6.9 24.0 0.141 0.0 HOH
 2.422
 HD13
 O
LEU B:311 B:316 19.0 0.112 G -94.0 10.4 19.0 0.112 0.0 HOH
 2.701
 HD23
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 LEU A:311 A:316 24.0 0.141 G -105.1 6.2 24.0 0.141 0.0 HOH
 2.410
 HD13
 O
LEU B:311 B:316 21.0 0.124 G -94.6 10.1 21.0 0.124 0.0 HOH
 2.747
 HD23
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 LEU A:316 A:316 25.0 0.147 G -102.4 6.8 25.0 0.147 0.0 HOH
 3.077
 CD1
 O
LEU B:316 B:316 23.0 0.135 G -104.3 8.9 23.0 0.135 0.0 GOL
HOH
 7.605
3.159
 CD1
CD1
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 LEU A:316 A:316 21.0 0.124 G -96.3 1.6