Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241817472 . G A CCDS2543.1:NM_000030.2:c.976Gta>Ata_NP_000021.1:p.326V>I Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 VAL A:326 A:326 36.0 0.232 -64.5 129.5 36.0 0.232 0.0
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 VAL A:326 A:326 34.0 0.219 -76.8 119.3 34.0 0.219 0.0
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 VAL A:326 A:326 32.0 0.206 -63.0 125.2 32.0 0.206 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 VAL A:326 A:326 40.0 NA -60.9 119.2 40.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 VAL A:328 A:326 37.0 0.239 -75.1 118.7 37.0 0.239 0.0 HOH
 3.426
 O
 O
VAL C:328 C:326 29.0 0.187 -68.7 121.9 29.0 0.187 0.0 HOH
 2.788
 O
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 VAL A:326 A:326 37.0 0.239 -65.0 119.5 37.0 0.239 0.0 HOH
 6.083
 CG2
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 VAL A:328 A:326 32.0 0.206 -68.9 124.8 32.0 0.206 0.0 BME
HOH
 9.871
2.757
 CG2
O
 C1
O
VAL B:328 C:326 28.0 0.181 -66.1 121.3 28.0 0.181 0.0 BME
HOH
 9.980
3.664
 CG2
CG1
 S2
O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 VAL A:328 A:326 32.0 0.206 -70.2 122.0 32.0 0.206 0.0
VAL B:328 B:326 32.0 0.206 -68.6 122.9 32.0 0.206 0.0
VAL C:328 C:326 33.0 0.213 -69.4 122.9 NA NA NA
VAL D:328 D:326 33.0 0.213 -69.3 123.7 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 VAL A:326 A:326 37.0 0.239 -70.8 122.6 37.0 0.239 0.0 HOH
 4.973
 CG1
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 VAL A:337 A:326 29.0 0.187 -62.7 131.3 29.0 0.187 0.0 HOH
 2.731
 O
 O
VAL B:337 B:326 34.0 0.219 -62.8 129.5 34.0 0.219 0.0 HOH
 3.490
 CG1
 O
VAL C:337 E:326 32.0 0.206 -59.7 127.8 NA NA NA
VAL D:337 G:326 33.0 0.213 -58.4 130.5 NA NA NA
VAL E:337 M:326 33.0 0.213 -64.9 126.2 NA NA NA
VAL F:337 N:326 33.0 0.213 -65.6 129.3 NA NA NA
VAL G:337 S:326 32.0 0.206 -59.2 131.4 NA NA NA
VAL H:337 T:326 35.0 0.226 -65.2 127.8 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 VAL A:328 A:326 27.0 0.174 -59.6 119.3 27.0 0.174 0.0 HOH
 9.284
 O
 O
VAL B:328 C:326 29.0 0.187 -72.3 122.9 29.0 0.187 0.0
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 VAL A:326 A:326 36.0 0.232 -82.6 122.9 36.0 0.232 0.0 HOH
 4.677
 C
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 VAL A:326 A:326 36.0 0.232 -64.9 120.5 36.0 0.232 0.0
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 VAL A:321 A:326 32.0 0.206 -57.1 127.4 32.0 0.206 0.0 HOH
 2.580
 HG11
 O
VAL B:321 B:326 31.0 0.2 -65.6 124.6 31.0 0.2 0.0 HOH
 2.679
 HG11
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 VAL A:321 A:326 32.0 0.206 -57.1 129.0 32.0 0.206 0.0 HOH
 2.639
 HG11
 O
VAL B:321 B:326 32.0 0.206 -68.3 126.3 32.0 0.206 0.0 HOH
 2.711
 HG11
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 VAL A:326 A:326 33.0 0.213 -67.9 120.0 33.0 0.213 0.0 HOH
 3.977
 CG2
 O
VAL B:326 B:326 27.0 0.174 -73.2 122.9 27.0 0.174 0.0 HOH
 4.119
 CG2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 VAL A:326 A:326 33.0 0.213 -59.0 124.5