Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241817475 . C A CCDS2543.1:NM_000030.2:c.979Ccc>Acc_NP_000021.1:p.327P>T Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 PRO A:327 A:327 22.0 0.152 -66.5 143.7 22.0 0.152 0.0 HOH
 8.793
 CB
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 PRO A:327 A:327 25.0 0.172 -60.9 146.7 25.0 0.172 0.0
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 PRO A:327 A:327 26.0 0.179 -64.4 137.5 26.0 0.179 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 PRO A:327 A:327 64.0 0.441 -62.5 131.3 64.0 0.441 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 PRO A:329 A:327 33.0 0.228 -62.0 144.2 22.0 0.152 0.076 B:P50542:0.076
 HOH
 3.840
 N
 O
PRO C:329 C:327 29.0 0.2 -59.3 134.5 15.0 0.103 0.097 D:P50542:0.097
 HOH
 3.341
 O
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 PRO A:327 A:327 24.0 0.166 -61.6 135.7 24.0 0.166 0.0 HOH
 8.112
 N
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 PRO A:329 A:327 31.0 0.214 -67.7 142.9 11.0 0.076 0.138 C:P50542:0.138
 HOH
 3.117
 O
 O
PRO B:329 C:327 34.0 0.234 -62.7 142.6 17.0 0.117 0.117 D:P50542:0.117
 HOH
 3.232
 O
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 PRO A:329 A:327 28.0 0.193 -58.3 143.7 28.0 0.193 0.0
PRO B:329 B:327 26.0 0.179 -62.5 146.7 26.0 0.179 0.0
PRO C:329 C:327 29.0 0.2 -61.8 146.8 NA NA NA
PRO D:329 D:327 29.0 0.2 -63.3 145.9 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 PRO A:327 A:327 20.0 0.138 -50.6 133.5 20.0 0.138 0.0 HOH
 4.063
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 PRO A:338 A:327 13.0 0.09 -73.3 142.6 13.0 0.09 0.0 HOH
 3.705
 O
 O
PRO B:338 B:327 23.0 0.159 -68.8 143.5 23.0 0.159 0.0 HOH
 3.829
 CA
 O
PRO C:338 E:327 25.0 0.172 -73.2 146.0 NA NA NA
PRO D:338 G:327 22.0 0.152 -70.6 141.0 NA NA NA
PRO E:338 M:327 23.0 0.159 -67.5 137.3 NA NA NA
PRO F:338 N:327 25.0 0.172 -70.0 143.5 NA NA NA
PRO G:338 S:327 24.0 0.166 -73.0 138.3 NA NA NA
PRO H:338 T:327 25.0 0.172 -69.9 140.4 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 PRO A:329 A:327 34.0 0.234 -65.0 140.3 16.0 0.11 0.124 C:P50542:0.124
 HOH
 8.984
 CA
 O
PRO B:329 C:327 35.0 0.241 -66.3 143.9 16.0 0.11 0.131 D:P50542:0.131
 HOH
 8.229
 O
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 PRO A:327 A:327 23.0 0.159 -52.2 112.8 23.0 0.159 0.0 HOH
 4.225
 N
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 PRO A:327 A:327 24.0 0.166 -59.5 126.7 24.0 0.166 0.0
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 PRO A:322 A:327 26.0 0.179 -65.1 140.2 26.0 0.179 0.0 HOH
 2.774
 HA
 O
PRO B:322 B:327 29.0 0.2 -59.4 146.4 29.0 0.2 0.0 HOH
 3.231
 HB2
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 PRO A:322 A:327 26.0 0.179 -66.6 140.9 26.0 0.179 0.0 HOH
 2.676
 HA
 O
PRO B:322 B:327 27.0 0.186 -62.4 144.6 27.0 0.186 0.0 HOH
 3.423
 HB2
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 PRO A:327 A:327 29.0 0.2 -67.5 135.3 29.0 0.2 0.0 HOH
 3.829
 N
 O
PRO B:327 B:327 23.0 0.159 -61.6 134.5 23.0 0.159 0.0 HOH
 3.612
 CG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 PRO A:327 A:327 24.0 0.166 -65.1 138.6