Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241818135 . T A CCDS2543.1:NM_000030.2:c.1076cTg>cAg_NP_000021.1:p.359L>Q Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 LEU A:359 A:359 3.0 0.018 E -123.6 144.5 3.0 0.018 0.0 GOL
HOH
 8.670
7.318
 CD2
CA
 O2
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 LEU A:359 A:359 4.0 0.024 E -113.9 141.8 4.0 0.024 0.0 HOH
 8.834
 CD1
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LEU A:359 A:359 2.0 0.012 E -110.8 147.2 2.0 0.012 0.0 HOH
 8.829
 CD2
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 LEU A:359 A:359 21.0 NA E -98.3 138.1 21.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 LEU A:361 A:359 2.0 0.012 E -103.8 146.1 2.0 0.012 0.0 HOH
 4.806
 N
 O
LEU C:361 C:359 1.0 0.006 E -104.9 144.0 1.0 0.006 0.0 HOH
 4.898
 N
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 LEU A:359 A:359 4.0 0.024 E -113.3 147.0 4.0 0.024 0.0 HOH
 5.890
 CD2
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 LEU A:361 A:359 1.0 0.006 E -101.4 147.5 1.0 0.006 0.0 BME
HOH
 7.918
4.912
 CA
N
 C1
O
LEU B:361 C:359 1.0 0.006 E -106.3 147.0 1.0 0.006 0.0 BME
HOH
 7.480
4.879
 CD2
N
 S2
O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 LEU A:361 A:359 2.0 0.012 E -106.3 150.0 2.0 0.012 0.0
LEU B:361 B:359 1.0 0.006 E -105.6 150.0 1.0 0.006 0.0
LEU C:361 C:359 1.0 0.006 E -106.1 150.7 NA NA NA
LEU D:361 D:359 1.0 0.006 E -105.6 151.2 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 LEU A:359 A:359 2.0 0.012 E -120.3 145.5 2.0 0.012 0.0 AOA
HOH
 9.864
6.960
 C
CA
 O3
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 LEU A:370 A:359 3.0 0.018 E -107.7 148.3 3.0 0.018 0.0 HOH
 5.004
 N
 O
LEU B:370 B:359 2.0 0.012 E -107.6 150.2 2.0 0.012 0.0 HOH
 4.897
 N
 O
LEU C:370 E:359 2.0 0.012 E -104.5 150.6 NA NA NA
LEU D:370 G:359 2.0 0.012 E -105.1 151.0 NA NA NA
LEU E:370 M:359 3.0 0.018 E -103.5 146.9 NA NA NA
LEU F:370 N:359 2.0 0.012 E -102.7 148.9 NA NA NA
LEU G:370 S:359 2.0 0.012 E -102.0 151.5 NA NA NA
LEU H:370 T:359 2.0 0.012 E -106.8 146.8 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 LEU A:361 A:359 2.0 0.012 E -103.4 144.8 2.0 0.012 0.0 BME
HOH
 9.894
8.092
 C
CA
 O1
O
LEU B:361 C:359 2.0 0.012 E -99.1 142.4 2.0 0.012 0.0
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 LEU A:359 A:359 3.0 0.018 E -113.8 149.2 3.0 0.018 0.0 HOH
 7.783
 CD1
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 LEU A:359 A:359 3.0 0.018 E -116.2 151.6 3.0 0.018 0.0 HOH
 7.618
 C
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 LEU A:354 A:359 1.0 0.006 E -102.0 150.3 1.0 0.006 0.0 HOH
 4.576
 HD23
 O
LEU B:354 B:359 1.0 0.006 E -104.9 150.5 1.0 0.006 0.0 HOH
 4.574
 HD23
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 LEU A:354 A:359 2.0 0.012 E -102.4 148.3 2.0 0.012 0.0 HOH
 4.525
 HD23
 O
LEU B:354 B:359 2.0 0.012 E -102.4 150.1 2.0 0.012 0.0 HOH
 4.497
 HD23
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 LEU A:359 A:359 2.0 0.012 E -103.2 149.0 2.0 0.012 0.0 GOL
HOH
 9.963
4.925
 CD2
N
 O3
O
LEU B:359 B:359 2.0 0.012 E -106.2 148.3 2.0 0.012 0.0 HOH
 4.823
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 LEU A:359 A:359 2.0 0.012 E -94.3 152.3