Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241818167 . C A CCDS2543.1:NM_000030.2:c.1108Cgc>Agc_NP_000021.1:p.370R>S Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 ARG A:370 A:370 135.0 0.6 H -68.4 -35.2 135.0 0.6 0.0 GOL
HOH
 3.204
5.780
 N
O
 O1
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 ARG A:370 A:370 130.0 0.578 H -65.5 -33.3 130.0 0.578 0.0 HOH
 5.557
 O
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ARG A:370 A:370 120.0 0.533 H -62.8 -37.0 120.0 0.533 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ARG A:370 A:370 39.0 NA H -54.3 -42.6 39.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 ARG A:372 A:370 148.0 0.658 H -63.1 -34.9 148.0 0.658 0.0 HOH
 2.494
 NH1
 O
ARG C:372 C:370 148.0 0.658 H -78.8 -39.1 148.0 0.658 0.0 HOH
 3.166
 NH2
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 ARG A:370 A:370 138.0 0.613 H -54.9 -44.1 138.0 0.613 0.0
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 ARG A:372 A:370 135.0 0.6 H -63.9 -40.2 135.0 0.6 0.0 BME
HOH
 4.016
2.794
 NH1
N
 O1
O
ARG B:372 C:370 143.0 0.636 H -63.6 -34.9 143.0 0.636 0.0 HOH
 2.864
 N
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 ARG A:372 A:370 149.0 0.662 H -79.1 -29.0 149.0 0.662 0.0
ARG B:372 B:370 152.0 0.676 H -79.3 -29.1 152.0 0.676 0.0
ARG C:372 C:370 154.0 0.684 H -78.8 -29.0 NA NA NA
ARG D:372 D:370 154.0 0.684 H -80.1 -29.5 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 ARG A:370 A:370 137.0 0.609 H -59.9 -41.0 137.0 0.609 0.0 GOL
HOH
 2.886
2.838
 CB
NH2
 O1
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 ARG A:381 A:370 139.0 0.618 H -62.8 -34.4 139.0 0.618 0.0 HOH
 2.673
 NH2
 O
ARG B:381 B:370 132.0 0.587 H -59.0 -35.1 132.0 0.587 0.0 HOH
 2.152
 NH2
 O
ARG C:381 E:370 138.0 0.613 H -56.7 -37.4 NA NA NA
ARG D:381 G:370 137.0 0.609 H -60.7 -32.3 NA NA NA
ARG E:381 M:370 136.0 0.604 H -62.5 -33.0 NA NA NA
ARG F:381 N:370 137.0 0.609 H -61.9 -34.4 NA NA NA
ARG G:381 S:370 137.0 0.609 H -63.0 -35.6 NA NA NA
ARG H:381 T:370 135.0 0.6 H -60.0 -33.6 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 ARG A:372 A:370 138.0 0.613 H -68.1 -35.2 138.0 0.613 0.0
ARG B:372 C:370 136.0 0.604 H -66.2 -38.2 136.0 0.604 0.0 HOH
 3.470
 N
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 ARG A:370 A:370 140.0 0.622 H -62.8 -31.5 140.0 0.622 0.0 HOH
 4.729
 NH1
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 ARG A:370 A:370 158.0 0.702 H -50.2 -47.8 158.0 0.702 0.0 HOH
 7.353
 O
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 ARG A:365 A:370 127.0 0.564 H -64.4 -35.7 127.0 0.564 0.0 HOH
 2.600
 HB3
 O
ARG B:365 B:370 144.0 0.64 H -57.5 -45.2 144.0 0.64 0.0 HOH
 2.081
 H
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 ARG A:365 A:370 135.0 0.6 H -62.4 -34.6 135.0 0.6 0.0 HOH
 2.691
 HB3
 O
ARG B:365 B:370 144.0 0.64 H -57.1 -44.4 144.0 0.64 0.0 HOH
 2.059
 H
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 ARG A:370 A:370 155.0 0.689 H -57.5 -38.5 155.0 0.689 0.0 HOH
 2.979
 N
 O
ARG B:370 B:370 161.0 0.716 H -59.8 -34.0 161.0 0.716 0.0 HOH
 2.841
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 ARG A:370 A:370 130.0 0.578 H -66.2 -37.7