Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241818170 . G A CCDS2543.1:NM_000030.2:c.1111Gag>Aag_NP_000021.1:p.371E>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLU A:371 A:371 125.0 0.658 H -54.3 -51.6 125.0 0.658 0.0 GOL
GOL
HOH
 9.429
2.924
3.726
 O
OE1
CB
 O1
O1
O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLU A:371 A:371 125.0 0.658 H -55.6 -50.9 125.0 0.658 0.0 HOH
 6.366
 N
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:371 A:371 101.0 0.532 H -48.0 -55.8 101.0 0.532 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLU A:371 A:371 105.0 0.553 H -50.3 -52.5 105.0 0.553 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLU A:373 A:371 134.0 0.705 H -58.5 -45.0 134.0 0.705 0.0 HOH
 2.713
 OE1
 O
GLU C:373 C:371 119.0 0.626 H -53.5 -42.5 119.0 0.626 0.0 HOH
 3.294
 CG
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLU A:371 A:371 113.0 0.595 H -50.7 -50.4 113.0 0.595 0.0 HOH
 8.042
 O
 O
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLU A:373 A:371 133.0 0.7 H -53.2 -46.0 133.0 0.7 0.0 HOH
 2.907
 OE1
 O
GLU B:373 C:371 63.0 NA H -65.4 -34.0 63.0 NA NA HOH
 3.051
 N
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLU A:373 A:371 126.0 0.663 H -62.1 -47.6 126.0 0.663 0.0
GLU B:373 B:371 114.0 0.6 H -59.5 -48.9 114.0 0.6 0.0
GLU C:373 C:371 124.0 0.653 H -60.3 -47.6 NA NA NA
GLU D:373 D:371 124.0 0.653 H -60.4 -48.1 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLU A:371 A:371 126.0 0.663 H -51.1 -53.7 126.0 0.663 0.0 GOL
GOL
HOH
 9.153
2.644
3.183
 O
OE1
CB
 O2
O1
O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLU A:382 A:371 128.0 0.674 H -65.4 -37.4 128.0 0.674 0.0 HOH
 2.721
 OE1
 O
GLU B:382 B:371 124.0 0.653 H -62.7 -44.2 124.0 0.653 0.0 HOH
 2.623
 OE2
 O
GLU C:382 E:371 123.0 0.647 H -64.0 -42.0 NA NA NA
GLU D:382 G:371 129.0 0.679 H -63.3 -41.4 NA NA NA
GLU E:382 M:371 125.0 0.658 H -61.3 -42.4 NA NA NA
GLU F:382 N:371 125.0 0.658 H -64.1 -41.5 NA NA NA
GLU G:382 S:371 126.0 0.663 H -63.2 -38.8 NA NA NA
GLU H:382 T:371 124.0 0.653 H -62.1 -44.0 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLU A:373 A:371 141.0 0.742 H -59.2 -43.5 141.0 0.742 0.0
GLU B:373 C:371 67.0 NA H -54.4 -39.4 67.0 NA NA HOH
 3.022
 N
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLU A:371 A:371 110.0 0.579 H -61.4 -50.7 110.0 0.579 0.0 HOH
 2.380
 OE2
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLU A:371 A:371 122.0 0.642 H -61.2 -30.7 122.0 0.642 0.0 HOH
 7.090
 O
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLU A:366 A:371 102.0 0.537 H -51.6 -50.3 102.0 0.537 0.0 HOH
 1.799
 OE2
 O
GLU B:366 B:371 109.0 0.574 H -55.1 -44.6 109.0 0.574 0.0 HOH
 2.659
 OE1
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLU A:366 A:371 129.0 0.679 H -54.5 -47.4 129.0 0.679 0.0 HOH
 2.223
 H
 O
GLU B:366 B:371 122.0 0.642 H -57.5 -41.2 122.0 0.642 0.0 HOH
 2.861
 OE1
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 GLU A:371 A:371 108.0 0.568 H -59.9 -41.5 108.0 0.568 0.0 HOH
 2.601
 OE1
 O
GLU B:371 B:371 137.0 0.721 H -66.2 -43.7 137.0 0.721 0.0 HOH
 3.087
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLU A:371 A:371 123.0 0.647 H -62.2 -42.2