Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241818201 . G A CCDS2543.1:NM_000030.2:c.1142aGg>aAg_NP_000021.1:p.381R>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 ARG A:381 A:381 97.0 0.431 H -52.0 -58.1 97.0 0.431 0.0 HOH
 3.026
 NH2
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 ARG A:381 A:381 96.0 0.427 H -56.4 -57.7 96.0 0.427 0.0 HOH
 3.055
 NH1
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ARG A:381 A:381 107.0 0.476 H -54.3 -66.5 107.0 0.476 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ARG A:381 A:381 43.0 NA H -53.5 -70.3 43.0 NA NA
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 ARG A:383 A:381 147.0 0.653 H -54.1 -44.9 83.0 0.369 0.284 B:P50542:0.284
 HOH
 3.168
 NH2
 O
ARG C:383 C:381 120.0 0.533 H -54.0 -49.3 102.0 0.453 0.08 D:P50542:0.08
 HOH
 2.666
 NH1
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 ARG A:381 A:381 101.0 0.449 H -48.0 -58.7 101.0 0.449 0.0
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 ARG A:383 A:381 120.0 0.533 H -54.3 -52.0 108.0 0.48 0.053 C:P50542:0.053
 HOH
 3.436
 NH2
 O
ARG B:383 C:381 79.0 0.351 H -49.2 -53.0 45.0 0.2 0.151 D:P50542:0.151
 HOH
 3.160
 NH2
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 ARG A:383 A:381 99.0 0.44 H -69.8 -46.3 99.0 0.44 0.0
ARG B:383 B:381 90.0 0.4 H -64.7 -54.7 90.0 0.4 0.0
ARG C:383 C:381 93.0 0.413 H -65.0 -52.8 NA NA NA
ARG D:383 D:381 136.0 0.604 H -63.1 -54.6 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 ARG A:381 A:381 91.0 0.404 H -58.2 -55.5 91.0 0.404 0.0 HOH
 6.886
 CD
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 ARG A:392 A:381 98.0 0.436 H -49.2 -47.8 98.0 0.436 0.0 HOH
 2.783
 NE
 O
ARG B:392 B:381 114.0 0.507 H -51.7 -49.1 114.0 0.507 0.0 HOH
 2.872
 NH1
 O
ARG C:392 E:381 97.0 0.431 H -50.3 -50.3 NA NA NA
ARG D:392 G:381 121.0 0.538 H -55.4 -46.7 NA NA NA
ARG E:392 M:381 102.0 0.453 H -54.9 -47.7 NA NA NA
ARG F:392 N:381 98.0 0.436 H -57.5 -42.5 NA NA NA
ARG G:392 S:381 99.0 0.44 H -59.5 -42.4 NA NA NA
ARG H:392 T:381 98.0 0.436 H -56.8 -49.8 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 ARG A:383 A:381 123.0 0.547 H -53.8 -45.8 94.0 0.418 0.129 C:P50542:0.129
ARG B:383 C:381 126.0 0.56 H -51.3 -44.7 80.0 0.356 0.204 D:P50542:0.204
 HOH
 5.947
 O
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 ARG A:381 A:381 101.0 0.449 H -69.0 -53.7 101.0 0.449 0.0 HOH
 2.868
 NE
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 ARG A:381 A:381 89.0 0.396 H -57.9 -50.6 89.0 0.396 0.0 HOH
 3.823
 NH1
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 ARG A:376 A:381 105.0 0.467 H -53.6 -47.5 105.0 0.467 0.0 HOH
 2.093
 HH21
 O
ARG B:376 B:381 87.0 0.387 H -51.5 -50.1 87.0 0.387 0.0 HOH
 2.016
 HH11
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 ARG A:376 A:381 109.0 0.484 H -51.7 -49.9 109.0 0.484 0.0 HOH
 2.156
 HE
 O
ARG B:376 B:381 94.0 0.418 H -53.7 -48.5 94.0 0.418 0.0 HOH
 2.231
 HH11
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 ARG A:381 A:381 114.0 0.507 H -59.8 -45.0 114.0 0.507 0.0 HOH
 2.926
 NH2
 O
ARG B:381 B:381 112.0 0.498 H -62.0 -47.4 112.0 0.498 0.0 HOH
 3.008
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 ARG A:381 A:381 108.0 0.48 H -58.6 -47.1