Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241818207 . C A CCDS2543.1:NM_000030.2:c.1148gCc>gAc_NP_000021.1:p.383A>D Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 ALA A:383 A:383 0.0 0.0 H -51.2 -54.5 0.0 0.0 0.0 HOH
 6.816
 O
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 ALA A:383 A:383 0.0 0.0 H -55.7 -47.0 0.0 0.0 0.0 HOH
 7.353
 CB
 O
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ALA A:383 A:383 0.0 0.0 H -57.8 -52.7 0.0 0.0 0.0 HOH
 9.067
 CB
 O
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 ALA A:383 A:383 0.0 0.0 H -60.7 -48.5 0.0 0.0 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 ALA A:385 A:383 0.0 0.0 H -60.1 -46.1 0.0 0.0 0.0 HOH
 6.226
 N
 O
ALA C:385 C:383 0.0 0.0 H -68.1 -37.5 0.0 0.0 0.0 HOH
 6.286
 N
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 ALA A:383 A:383 0.0 0.0 H -58.1 -39.5 0.0 0.0 0.0
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 ALA A:385 A:383 0.0 0.0 H -63.2 -35.6 0.0 0.0 0.0 HOH
 6.275
 N
 O
ALA B:385 C:383 0.0 0.0 H -68.0 -41.3 0.0 0.0 0.0 HOH
 6.125
 N
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 ALA A:385 A:383 0.0 0.0 H -56.4 -45.7 0.0 0.0 0.0
ALA B:385 B:383 0.0 0.0 H -57.1 -43.7 0.0 0.0 0.0
ALA C:385 C:383 0.0 0.0 H -56.3 -45.3 NA NA NA
ALA D:385 D:383 0.0 0.0 H -56.5 -44.3 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 ALA A:383 A:383 0.0 0.0 H -54.5 -40.3 0.0 0.0 0.0 HOH
 7.196
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 ALA A:394 A:383 0.0 0.0 H -60.5 -40.0 0.0 0.0 0.0 HOH
 5.024
 O
 O
ALA B:394 B:383 0.0 0.0 H -62.3 -43.1 0.0 0.0 0.0 HOH
 5.484
 O
 O
ALA C:394 E:383 0.0 0.0 H -61.8 -41.2 NA NA NA
ALA D:394 G:383 0.0 0.0 H -60.1 -41.1 NA NA NA
ALA E:394 M:383 0.0 0.0 H -64.9 -37.9 NA NA NA
ALA F:394 N:383 0.0 0.0 H -63.2 -42.4 NA NA NA
ALA G:394 S:383 0.0 0.0 H -63.1 -39.8 NA NA NA
ALA H:394 T:383 0.0 0.0 H -57.6 -46.3 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 ALA A:385 A:383 0.0 0.0 H -57.4 -49.2 0.0 0.0 0.0
ALA B:385 C:383 0.0 0.0 H -62.7 -43.5 0.0 0.0 0.0 HOH
 6.239
 N
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 ALA A:383 A:383 0.0 0.0 H -50.8 -53.6 0.0 0.0 0.0 HOH
 2.878
 O
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 ALA A:383 A:383 0.0 0.0 H -57.2 -52.1 0.0 0.0 0.0 HOH
 6.357
 N
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 ALA A:378 A:383 0.0 0.0 H -66.1 -36.6 0.0 0.0 0.0 HOH
 6.115
 H
 O
ALA B:378 B:383 0.0 0.0 H -62.4 -38.2 0.0 0.0 0.0 HOH
 5.785
 C
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 ALA A:378 A:383 0.0 0.0 H -66.4 -36.2 0.0 0.0 0.0 HOH
 5.956
 H
 O
ALA B:378 B:383 0.0 0.0 H -61.3 -35.9 0.0 0.0 0.0 HOH
 5.918
 C
 O
2yob 1 P21549 99.74 0.0 X-RAY
 2013-10-30 ALA A:383 A:383 1.0 0.009 H -58.0 -47.7 1.0 0.009 0.0 HOH
 2.966
 O
 O
ALA B:383 B:383 1.0 0.009 H -69.6 -40.4 1.0 0.009 0.0 HOH
 3.031
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 ALA A:383 A:383 0.0 0.0 H -59.2 -45.2