Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 241818212 . C A CCDS2543.1:NM_000030.2:c.1153Cag>Aag_NP_000021.1:p.385Q>K Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1h0c 1 P21549 100.0 0.0 X-RAY
 2003-06-12 GLN A:385 A:385 125.0 0.694 H -92.9 -20.8 125.0 0.694 0.0 HOH
 5.128
 NE2
 O
5og0 1 P21549 100.0 0.0 X-RAY
 2017-09-27 GLN A:385 A:385 131.0 0.728 H -75.7 -21.2 131.0 0.728 0.0
6rv0 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:385 A:385 133.0 0.739 H -88.2 -7.2 133.0 0.739 0.0
6rv1 1 P21549 100.0 0.0 X-RAY
 2020-04-08 GLN A:385 A:385 147.0 0.817 T -93.2 -0.9 147.0 0.817 0.0
3r9a 1 P21549 100.0 0.0 X-RAY
 2011-05-11 GLN A:387 A:385 147.0 0.817 H -71.4 -35.8 40.0 0.222 0.595 B:P50542:0.594
 HOH
 2.820
 OE1
 O
GLN C:387 C:385 145.0 0.806 H -80.9 -37.5 43.0 0.239 0.567 D:P50542:0.567
 HOH
 4.402
 O
 O
5ofy 1 P21549 99.74 0.0 X-RAY
 2017-09-27 GLN A:385 A:385 133.0 0.739 H -78.8 -41.4 133.0 0.739 0.0
4kyo 1 P21549 99.74 0.0 X-RAY
 2014-11-19 GLN A:387 A:385 143.0 0.794 H -71.0 -35.7 44.0 0.244 0.55 C:P50542:0.55
 HOH
 2.939
 NE2
 O
GLN B:387 C:385 115.0 0.639 H -70.4 -37.8 23.0 0.128 0.511 D:P50542:0.511
 HOH
 3.037
 NE2
 O
4i8a 1 P21549 99.74 0.0 X-RAY
 2013-05-01 GLN A:387 A:385 111.0 0.617 H -81.3 -46.1 111.0 0.617 0.0
GLN B:387 B:385 132.0 0.733 H -89.5 -35.2 132.0 0.733 0.0
GLN C:387 C:385 107.0 0.594 H -89.5 -50.8 NA NA NA
GLN D:387 D:385 122.0 0.678 H -89.8 -34.1 NA NA NA
1j04 1 P21549 99.74 0.0 X-RAY
 2003-11-11 GLN A:385 A:385 133.0 0.739 H -75.7 -39.7 133.0 0.739 0.0 HOH
 5.212
 O
 O
5luc 1 P21549 99.74 0.0 X-RAY
 2017-09-20 GLN A:396 A:385 128.0 0.711 H -77.9 -31.7 128.0 0.711 0.0 HOH
 2.829
 NE2
 O
GLN B:396 B:385 90.0 NA H -82.6 -25.6 90.0 NA NA HOH
 3.356
 CG
 O
GLN C:396 E:385 129.0 0.717 H -79.7 -26.6 NA NA NA
GLN D:396 G:385 87.0 NA H -80.1 -23.7 NA NA NA
GLN E:396 M:385 123.0 0.683 H -84.8 -11.6 NA NA NA
GLN F:396 N:385 134.0 0.744 H -74.5 -34.5 NA NA NA
GLN G:396 S:385 133.0 0.739 H -81.0 -31.9 NA NA NA
GLN H:396 T:385 127.0 0.706 H -74.2 -31.2 NA NA NA
4kxk 1 P21549 99.49 0.0 X-RAY
 2014-11-19 GLN A:387 A:385 135.0 0.75 H -76.2 -40.7 42.0 0.233 0.517 C:P50542:0.517
GLN B:387 C:385 137.0 0.761 H -72.8 -39.2 41.0 0.228 0.533 D:P50542:0.533
 HOH
 3.499
 OE1
 O
4cbr 1 P21549 99.23 0.0 X-RAY
 2014-07-09 GLN A:385 A:385 119.0 0.661 H -59.2 -67.6 119.0 0.661 0.0 HOH
 2.178
 OE1
 O
4cbs 1 P21549 98.72 0.0 X-RAY
 2014-07-09 GLN A:385 A:385 125.0 0.694 H -68.0 -44.2 125.0 0.694 0.0 HOH
 5.403
 NE2
 O
5f9s 1 P21549 100.0 0.0 X-RAY
 2016-12-21 GLN A:380 A:385 132.0 0.733 H -100.7 -3.7 132.0 0.733 0.0 HOH
 2.501
 O
 O
GLN B:380 B:385 141.0 0.783 H -76.7 -28.3 141.0 0.783 0.0 HOH
 2.347
 HG3
 O
5hhy 1 P21549 100.0 0.0 X-RAY
 2017-01-25 GLN A:380 A:385 137.0 0.761 H -99.1 -5.9 137.0 0.761 0.0 HOH
 2.554
 O
 O
GLN B:380 B:385 147.0 0.817 H -77.6 -28.3 147.0 0.817 0.0 HOH
 1.840
 HE21
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21549-f1 1 P21549 100.0 0.0 GLN A:385 A:385 135.0 0.75 H -84.5 -30.9