Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 37579971 | . | C | A | CCDS1790.1:NM_012413.3:c.160Cgg>Agg_NP_036545.1:p.54R>R | Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4ywy | 1 | Q16769 | 99.45 | 0.0 |
X-RAY |
2015-08-05 | ARG | A:54 | A:54 | 116.0 | 0.516 | H | -63.4 | -44.8 | 116.0 | 0.516 | 0.0 |
HOH |
2.663 |
NE |
O |
||
| ARG | B:54 | B:54 | 123.0 | 0.547 | H | -65.1 | -36.9 | NA | NA | NA | |||||||||||||
| ARG | C:54 | C:54 | 107.0 | 0.476 | H | -63.7 | -42.0 | NA | NA | NA | |||||||||||||
| 2afm | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2005-08-23 | ARG | A:22 | A:54 | 120.0 | 0.533 | H | -61.5 | -38.5 | 120.0 | 0.533 | 0.0 |
HOH |
2.766 |
NH2 |
O |
||
| ARG | B:22 | B:54 | 119.0 | 0.529 | H | -61.5 | -40.1 | NA | NA | NA | |||||||||||||
| 2afo | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2005-08-23 | ARG | A:22 | A:54 | 122.0 | 0.542 | H | -65.4 | -37.3 | 122.0 | 0.542 | 0.0 |
HOH |
2.630 |
NE |
O |
||
| ARG | B:22 | B:54 | 118.0 | 0.524 | H | -70.4 | -41.3 | NA | NA | NA | |||||||||||||
| 2afw | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2005-08-23 | ARG | A:22 | A:54 | 117.0 | 0.52 | H | -61.2 | -39.9 | 117.0 | 0.52 | 0.0 |
HOH |
2.818 |
NE |
O |
||
| ARG | B:22 | B:54 | 128.0 | 0.569 | H | -67.4 | -39.1 | NA | NA | NA | |||||||||||||
| 2afx | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2005-08-23 | ARG | A:22 | A:54 | 120.0 | 0.533 | H | -63.7 | -39.0 | 120.0 | 0.533 | 0.0 |
HOH |
2.678 |
NE |
O |
||
| ARG | B:22 | B:54 | 124.0 | 0.551 | H | -64.9 | -40.1 | NA | NA | NA | |||||||||||||
| 2afz | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2005-08-23 | ARG | A:22 | A:54 | 119.0 | 0.529 | H | -63.7 | -37.5 | 119.0 | 0.529 | 0.0 |
HOH |
2.400 |
NH2 |
O |
||
| ARG | B:22 | B:54 | 124.0 | 0.551 | H | -64.6 | -39.6 | NA | NA | NA | |||||||||||||
| 3pbb | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2011-02-02 | ARG | A:22 | A:54 | 126.0 | 0.56 | H | -65.1 | -40.4 | 126.0 | 0.56 | 0.0 |
HOH |
2.828 |
NH1 |
O |
||
| ARG | B:22 | B:54 | 122.0 | 0.542 | H | -66.0 | -27.8 | NA | NA | NA | |||||||||||||
| 2zef | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 121.0 | 0.538 | H | -62.8 | -38.0 | 121.0 | 0.538 | 0.0 |
HOH |
2.804 |
NE |
O |
||
| ARG | B:22 | B:54 | 121.0 | 0.538 | H | -60.2 | -40.3 | NA | NA | NA | |||||||||||||
| 2zed | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 118.0 | 0.524 | H | -66.0 | -35.1 | 118.0 | 0.524 | 0.0 |
HOH |
2.837 |
NE |
O |
||
| ARG | B:22 | B:54 | 119.0 | 0.529 | H | -65.6 | -37.4 | NA | NA | NA | |||||||||||||
| 2afu | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2005-08-23 | ARG | A:22 | A:54 | 117.0 | 0.52 | H | -60.6 | -35.9 | 117.0 | 0.52 | 0.0 |
HOH |
2.516 |
NE |
O |
||
| ARG | B:22 | B:54 | 112.0 | 0.498 | H | -67.9 | -38.9 | NA | NA | NA | |||||||||||||
| 2zeh | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 121.0 | 0.538 | H | -65.0 | -36.1 | 121.0 | 0.538 | 0.0 |
HOH |
2.687 |
NE |
O |
||
| ARG | B:22 | B:54 | 123.0 | 0.547 | H | -67.6 | -37.6 | NA | NA | NA | |||||||||||||
| 2zeo | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 119.0 | 0.529 | H | -65.6 | -34.2 | 119.0 | 0.529 | 0.0 |
HOH |
2.554 |
NH2 |
O |
||
| ARG | B:22 | B:54 | 121.0 | 0.538 | H | -64.1 | -40.3 | NA | NA | NA | |||||||||||||
| 2zee | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 123.0 | 0.547 | H | -62.7 | -32.9 | 123.0 | 0.547 | 0.0 |
HOH |
2.714 |
NE |
O |
||
| ARG | B:22 | B:54 | 125.0 | 0.556 | H | -59.9 | -42.3 | NA | NA | NA | |||||||||||||
| 3pbe | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2011-02-02 | ARG | A:22 | A:54 | 109.0 | 0.484 | H | -62.6 | -41.3 | 109.0 | 0.484 | 0.0 |
HOH |
2.886 |
NE |
O |
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| ARG | B:22 | B:54 | 113.0 | 0.502 | H | -64.7 | -42.8 | NA | NA | NA | |||||||||||||
| 2zem | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 121.0 | 0.538 | H | -68.0 | -31.8 | 121.0 | 0.538 | 0.0 |
HOH |
2.738 |
NE |
O |
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| ARG | B:22 | B:54 | 124.0 | 0.551 | H | -66.6 | -42.6 | NA | NA | NA | |||||||||||||
| 2zen | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 120.0 | 0.533 | H | -64.2 | -37.9 | 120.0 | 0.533 | 0.0 |
HOH |
2.698 |
NH2 |
O |
||
| ARG | B:22 | B:54 | 120.0 | 0.533 | H | -64.3 | -38.6 | NA | NA | NA | |||||||||||||
| 2zel | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 117.0 | 0.52 | H | -64.5 | -35.5 | 117.0 | 0.52 | 0.0 |
HOH |
2.667 |
NE |
O |
||
| ARG | B:22 | B:54 | 120.0 | 0.533 | H | -65.0 | -37.6 | NA | NA | NA | |||||||||||||
| 2zeg | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 121.0 | 0.538 | H | -64.5 | -37.3 | 121.0 | 0.538 | 0.0 |
HOH |
2.577 |
NE |
O |
||
| ARG | B:22 | B:54 | 119.0 | 0.529 | H | -65.7 | -41.5 | NA | NA | NA | |||||||||||||
| 2zep | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:22 | A:54 | 117.0 | 0.52 | H | -63.5 | -36.5 | 117.0 | 0.52 | 0.0 |
HOH |
2.523 |
NE |
O |
||
| ARG | B:22 | B:54 | 119.0 | 0.529 | H | -59.8 | -38.7 | NA | NA | NA | |||||||||||||
| 7cm0 | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | ARG | A:20 | A:54 | 121.0 | 0.538 | H | -78.3 | -28.9 | 121.0 | 0.538 | 0.0 |
HOH |
9.859 |
NH2 |
O |
||
| ARG | B:20 | B:54 | 133.0 | 0.591 | H | -80.4 | -25.9 | NA | NA | NA | |||||||||||||
| ARG | C:20 | C:54 | 148.0 | 0.658 | H | -73.7 | -33.3 | NA | NA | NA | |||||||||||||
| ARG | D:20 | D:54 | 135.0 | 0.6 | H | -73.0 | -30.7 | NA | NA | NA | |||||||||||||
| 2afs | 1 | Q16769 | 99.7 | 0.0 |
X-RAY |
2005-08-23 | TRP | A:22 | A:54 | 149.0 | 0.584 | H | -63.2 | -38.6 | 149.0 | 0.584 | 0.0 |
HOH |
7.310 |
O |
O |
||
| TRP | B:22 | B:54 | 142.0 | 0.557 | H | -66.8 | -46.5 | NA | NA | NA | |||||||||||||
| 6yi1 | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2020-07-01 | ARG | A:22 | A:54 | 110.0 | 0.489 | H | -59.9 | -40.9 | 110.0 | 0.489 | 0.0 |
PG4 PHE HOH |
7.509 9.439 2.643 |
NH2 NE NH1 |
C3 CZ O |
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| ARG | B:22 | B:54 | 105.0 | 0.467 | H | -60.0 | -46.1 | NA | NA | NA | |||||||||||||
| 6yjy | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2020-07-01 | ARG | A:22 | A:54 | 124.0 | 0.551 | H | -60.7 | -38.2 | 124.0 | 0.551 | 0.0 |
SO4 HOH |
2.613 2.784 |
NH1 NE |
O1 O |
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| ARG | B:22 | B:54 | 110.0 | 0.489 | H | -61.0 | -37.5 | NA | NA | NA | |||||||||||||
| 4yu9 | 1 | Q16769 | 99.39 | 0.0 |
X-RAY |
2015-08-05 | ARG | A:22 | A:54 | 127.0 | 0.564 | H | -61.9 | -40.9 | 127.0 | 0.564 | 0.0 |
EDO HOH |
6.608 2.597 |
C NH2 |
C2 O |
||
| ARG | B:22 | B:54 | 105.0 | 0.467 | H | -54.8 | -45.5 | NA | NA | NA | |||||||||||||
| ARG | C:22 | C:54 | 125.0 | 0.556 | H | -58.0 | -46.9 | NA | NA | NA | |||||||||||||
| 6gbx | 1 | Q16769 | 99.39 | 0.0 |
X-RAY |
2018-09-19 | ARG | A:22 | A:54 | 117.0 | 0.52 | H | -61.7 | -41.1 | 117.0 | 0.52 | 0.0 |
HOH |
4.980 |
O |
O |
||
| ARG | B:22 | B:54 | 113.0 | 0.502 | H | -63.1 | -38.3 | NA | NA | NA | |||||||||||||
| ARG | C:22 | C:54 | 119.0 | 0.529 | H | -61.0 | -39.0 | NA | NA | NA | |||||||||||||
| 7d8e | 1 | Q16769 | 99.39 | 0.0 |
X-RAY |
2021-12-08 | ARG | A:22 | A:54 | 105.0 | 0.467 | H | -62.3 | -42.0 | 105.0 | 0.467 | 0.0 |
HOH |
5.037 |
O |
O |
||
| ARG | B:22 | B:54 | 97.0 | 0.431 | H | -67.5 | -40.0 | NA | NA | NA | |||||||||||||
| ARG | C:22 | C:54 | 107.0 | 0.476 | H | -65.6 | -38.9 | NA | NA | NA | |||||||||||||
| 7coz | 1 | Q16769 | 99.39 | 0.0 |
X-RAY |
2021-01-13 | ARG | A:20 | A:54 | 108.0 | 0.48 | H | -63.6 | -42.3 | 108.0 | 0.48 | 0.0 |
HOH |
5.226 |
O |
O |
||
| ARG | B:20 | B:54 | 106.0 | 0.471 | H | -64.0 | -39.6 | NA | NA | NA | |||||||||||||
| ARG | C:20 | C:54 | 117.0 | 0.52 | H | -66.0 | -38.6 | NA | NA | NA | |||||||||||||
| 7cp0 | 1 | Q16769 | 99.39 | 0.0 |
X-RAY |
2021-01-13 | ARG | A:20 | A:54 | 117.0 | 0.52 | H | -63.7 | -39.9 | 117.0 | 0.52 | 0.0 |
HOH |
5.205 |
O |
O |
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| ARG | B:20 | B:54 | 116.0 | 0.516 | H | -63.6 | -37.3 | NA | NA | NA | |||||||||||||
| ARG | C:20 | C:54 | 119.0 | 0.529 | H | -64.4 | -39.5 | NA | NA | NA | |||||||||||||
| 3si0 | 1 | Q16769 | 100.0 | 0.0 |
X-RAY |
2011-06-29 | ARG | A:23 | A:54 | 104.0 | 0.462 | H | -55.6 | -35.2 | 104.0 | 0.462 | 0.0 |
NAG HOH |
9.590 4.831 |
N O |
O5 O |
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| 3si2 | 1 | B2RX76 | 86.24 | 0.0 |
X-RAY |
2011-06-29 | GLN | A:20 | A:55 | 96.0 | 0.533 | H | -62.9 | -43.8 | 96.0 | 0.533 | 0.0 |
NAG HOH |
8.875 3.125 |
N OE1 |
C1 O |
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| 3si1 | 1 | Q9CYK2 | 85.93 | 0.0 |
X-RAY |
2011-06-29 | GLN | A:20 | A:55 | 85.0 | 0.472 | H | -59.2 | -66.0 | 85.0 | 0.472 | 0.0 |
NAG HOH |
8.689 5.378 |
NE2 C |
O7 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q16769-f1 | 1 | Q16769 | 100.0 | 0.0 | ARG | A:54 | A:54 | 106.0 | 0.471 | H | -60.0 | -46.7 | |