Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 37580074 . G A CCDS1790.1:NM_012413.3:c.263cGt>cAt_NP_036545.1:p.88R>H Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ywy 1 Q16769 99.45 0.0 X-RAY
 2015-08-05 ARG A:88 A:88 27.0 0.12 H -58.7 -51.2 27.0 0.12 0.0 HOH
 2.826
 NH2
 O
ARG B:88 B:88 30.0 0.133 H -62.9 -48.8 NA NA NA
ARG C:88 C:88 24.0 0.107 H -59.3 -42.8 NA NA NA
2afm 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ARG A:56 A:88 35.0 0.156 H -62.8 -43.2 35.0 0.156 0.0 HOH
 2.685
 NE
 O
ARG B:56 B:88 39.0 0.173 H -61.6 -45.3 NA NA NA
2afo 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ARG A:56 A:88 37.0 0.164 H -62.3 -39.4 37.0 0.164 0.0 HOH
 3.133
 NE
 O
ARG B:56 B:88 35.0 0.156 H -62.4 -44.0 NA NA NA
2afw 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ARG A:56 A:88 35.0 0.156 H -62.9 -42.4 35.0 0.156 0.0 HOH
 2.669
 NE
 O
ARG B:56 B:88 38.0 0.169 H -60.4 -45.0 NA NA NA
2afx 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ARG A:56 A:88 36.0 0.16 H -62.5 -42.9 36.0 0.16 0.0 HOH
 2.671
 NE
 O
ARG B:56 B:88 38.0 0.169 H -62.2 -44.6 NA NA NA
2afz 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ARG A:56 A:88 36.0 0.16 H -62.5 -42.8 36.0 0.16 0.0 HOH
 2.712
 NE
 O
ARG B:56 B:88 38.0 0.169 H -62.2 -45.6 NA NA NA
3pbb 1 Q16769 100.0 0.0 X-RAY
 2011-02-02 ARG A:56 A:88 41.0 0.182 H -66.1 -39.7 41.0 0.182 0.0 HOH
 2.645
 NE
 O
ARG B:56 B:88 38.0 0.169 H -62.8 -46.6 NA NA NA
2zef 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 36.0 0.16 H -63.7 -41.0 36.0 0.16 0.0 HOH
 2.685
 NE
 O
ARG B:56 B:88 39.0 0.173 H -62.7 -45.4 NA NA NA
2zed 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 37.0 0.164 H -62.0 -41.2 37.0 0.164 0.0 HOH
 2.833
 NH2
 O
ARG B:56 B:88 39.0 0.173 H -60.5 -47.3 NA NA NA
2afu 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 ARG A:56 A:88 34.0 0.151 H -60.2 -38.0 34.0 0.151 0.0 HOH
 3.011
 NE
 O
ARG B:56 B:88 38.0 0.169 H -58.8 -45.4 NA NA NA
2zeh 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 34.0 0.151 H -61.6 -41.0 34.0 0.151 0.0 HOH
 2.840
 NE
 O
ARG B:56 B:88 39.0 0.173 H -63.6 -46.6 NA NA NA
2zeo 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 39.0 0.173 H -62.6 -42.8 39.0 0.173 0.0 HOH
 2.849
 NE
 O
ARG B:56 B:88 39.0 0.173 H -60.2 -45.7 NA NA NA
2zee 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 35.0 0.156 H -62.2 -45.9 35.0 0.156 0.0 HOH
 3.142
 NH2
 O
ARG B:56 B:88 36.0 0.16 H -63.2 -46.3 NA NA NA
3pbe 1 Q16769 99.7 0.0 X-RAY
 2011-02-02 ARG A:56 A:88 34.0 0.151 H -56.6 -45.1 34.0 0.151 0.0 HOH
 2.922
 NE
 O
ARG B:56 B:88 36.0 0.16 H -65.2 -45.6 NA NA NA
2zem 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 37.0 0.164 H -58.8 -40.8 37.0 0.164 0.0 HOH
 2.886
 NE
 O
ARG B:56 B:88 37.0 0.164 H -65.4 -43.3 NA NA NA
2zen 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 37.0 0.164 H -60.6 -42.6 37.0 0.164 0.0 HOH
 2.764
 NH2
 O
ARG B:56 B:88 39.0 0.173 H -61.4 -46.9 NA NA NA
2zel 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 35.0 0.156 H -59.1 -43.7 35.0 0.156 0.0 HOH
 2.952
 NH2
 O
ARG B:56 B:88 39.0 0.173 H -60.4 -47.8 NA NA NA
2zeg 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 37.0 0.164 H -60.3 -41.8 37.0 0.164 0.0 HOH
 3.070
 NE
 O
ARG B:56 B:88 38.0 0.169 H -58.8 -49.8 NA NA NA
2zep 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ARG A:56 A:88 38.0 0.169 H -60.3 -46.1 38.0 0.169 0.0 HOH
 2.795
 NE
 O
ARG B:56 B:88 38.0 0.169 H -58.1 -49.7 NA NA NA
7cm0 1 Q16769 100.0 0.0 X-RAY
 2021-12-22 ARG A:54 A:88 42.0 0.187 H -68.6 -37.0 42.0 0.187 0.0 HOH
 2.571
 NH2
 O
ARG B:54 B:88 43.0 0.191 H -67.2 -36.5 NA NA NA
ARG C:54 C:88 44.0 0.196 H -64.9 -38.3 NA NA NA
ARG D:54 D:88 41.0 0.182 H -67.0 -35.7 NA NA NA
2afs 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 ARG A:56 A:88 39.0 0.173 H -62.9 -37.5 39.0 0.173 0.0 HOH
 2.931
 NE
 O
ARG B:56 B:88 37.0 0.164 H -61.2 -46.7 NA NA NA
6yi1 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 ARG A:56 A:88 39.0 0.173 H -58.7 -46.5 39.0 0.173 0.0 HOH
 2.760
 NH2
 O
ARG B:56 B:88 38.0 0.169 H -59.8 -47.3 NA NA NA
6yjy 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 ARG A:56 A:88 38.0 0.169 H -64.7 -43.2 38.0 0.169 0.0 HOH
 2.779
 NE
 O
ARG B:56 B:88 40.0 0.178 H -59.5 -47.1 NA NA NA
4yu9 1 Q16769 99.39 0.0 X-RAY
 2015-08-05 ARG A:56 A:88 29.0 0.129 H -64.4 -46.3 29.0 0.129 0.0 HOH
 2.677
 NH2
 O
ARG B:56 B:88 30.0 0.133 H -58.8 -43.1 NA NA NA
ARG C:56 C:88 18.0 0.08 H -56.8 -46.4 NA NA NA
6gbx 1 Q16769 99.39 0.0 X-RAY
 2018-09-19 ARG A:56 A:88 25.0 0.111 H -64.6 -46.6 25.0 0.111 0.0 HOH
 2.948
 NH2
 O
ARG B:56 B:88 26.0 0.116 H -62.7 -45.9 NA NA NA
ARG C:56 C:88 24.0 0.107 H -62.1 -45.7 NA NA NA
7d8e 1 Q16769 99.39 0.0 X-RAY
 2021-12-08 ARG A:56 A:88 23.0 0.102 H -57.7 -46.2 23.0 0.102 0.0 SO4
HOH
 8.645
3.106
 C
NH2
 O4
O
ARG B:56 B:88 24.0 0.107 H -54.9 -50.0 NA NA NA
ARG C:56 C:88 26.0 0.116 H -56.9 -46.5 NA NA NA
7coz 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 ARG A:54 A:88 26.0 0.116 H -54.1 -50.5 26.0 0.116 0.0 HOH
 2.882
 NH2
 O
ARG B:54 B:88 27.0 0.12 H -57.4 -49.2 NA NA NA
ARG C:54 C:88 22.0 0.098 H -58.3 -49.0 NA NA NA
7cp0 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 ARG A:54 A:88 24.0 0.107 H -58.3 -49.5 24.0 0.107 0.0 HOH
 2.930
 NH2
 O
ARG B:54 B:88 24.0 0.107 H -59.4 -47.1 NA NA NA
ARG C:54 C:88 21.0 0.093 H -59.7 -49.2 NA NA NA
3si0 1 Q16769 100.0 0.0 X-RAY
 2011-06-29 ARG A:57 A:88 43.0 0.191 H -52.6 -47.1 43.0 0.191 0.0 CL
HOH
 9.610
2.849
 NH2
NH1
 CL
O
3si2 1 B2RX76 86.24 0.0 X-RAY
 2011-06-29 ARG A:54 A:89 35.0 0.156 H -60.4 -47.3 35.0 0.156 0.0 HOH
 2.777
 NH2
 O
3si1 1 Q9CYK2 85.93 0.0 X-RAY
 2011-06-29 ARG A:54 A:89 30.0 0.133 H -18.4 -67.7 30.0 0.133 0.0 HOH
 4.448
 NE
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16769-f1 1 Q16769 100.0 0.0 ARG A:88 A:88 34.0 0.151 H -63.4 -43.6