Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 37599543 . G A CCDS1790.1:NM_012413.3:c.868Gag>Aag_NP_036545.1:p.290E>K Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ywy 1 Q16769 99.45 0.0 X-RAY
 2015-08-05 GLU A:290 A:290 185.0 0.974 T -56.6 -34.1 185.0 0.974 0.0 HOH
 2.712
 O
 O
GLU B:290 B:290 105.0 NA T -56.3 -38.5 NA NA NA
GLU C:290 C:290 177.0 0.932 T -62.9 -33.3 NA NA NA
2afm 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 GLU A:258 A:290 170.0 0.895 T -60.2 -33.3 170.0 0.895 0.0 HOH
 2.941
 N
 O
GLU B:258 B:290 168.0 0.884 G -72.9 -20.7 NA NA NA
2afo 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 GLU A:258 A:290 168.0 0.884 T -60.9 -38.6 168.0 0.884 0.0 HOH
 2.830
 N
 O
GLU B:258 B:290 163.0 0.858 G -63.6 -37.4 NA NA NA
2afw 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 GLU A:258 A:290 170.0 0.895 T -57.9 -34.6 170.0 0.895 0.0 HOH
 2.932
 N
 O
GLU B:258 B:290 173.0 0.911 G -71.9 -19.6 NA NA NA
2afx 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 GLU A:258 A:290 172.0 0.905 T -60.6 -34.4 172.0 0.905 0.0 HOH
 2.977
 N
 O
GLU B:258 B:290 169.0 0.889 G -69.9 -24.4 NA NA NA
2afz 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 GLU A:258 A:290 174.0 0.916 T -59.9 -35.8 174.0 0.916 0.0 HOH
 2.949
 N
 O
GLU B:258 B:290 167.0 0.879 G -72.3 -23.5 NA NA NA
3pbb 1 Q16769 100.0 0.0 X-RAY
 2011-02-02 GLU A:258 A:290 188.0 0.989 T -68.8 -39.8 188.0 0.989 0.0 HOH
 9.079
 C
 O
GLU B:258 B:290 185.0 0.974 T -53.2 -54.0 NA NA NA
2zef 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 166.0 0.874 T -59.7 -34.1 166.0 0.874 0.0 HOH
 2.963
 N
 O
GLU B:258 B:290 180.0 0.947 G -75.0 -21.0 NA NA NA
2zed 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 170.0 0.895 T -60.2 -31.6 170.0 0.895 0.0 HOH
 2.906
 N
 O
GLU B:258 B:290 173.0 0.911 G -72.2 -26.9 NA NA NA
2afu 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 GLU A:258 A:290 175.0 0.921 T -58.0 -38.0 175.0 0.921 0.0 HOH
 2.899
 OE1
 O
GLU B:258 B:290 177.0 0.932 G -72.0 -23.8 NA NA NA
2zeh 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 168.0 0.884 T -59.8 -35.0 168.0 0.884 0.0 HOH
 2.885
 N
 O
GLU B:258 B:290 175.0 0.921 G -72.3 -24.1 NA NA NA
2zeo 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 169.0 0.889 T -62.2 -33.3 169.0 0.889 0.0 HOH
 2.893
 N
 O
GLU B:258 B:290 159.0 0.837 T -69.6 -33.1 NA NA NA
2zee 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 167.0 0.879 T -59.2 -32.7 167.0 0.879 0.0 HOH
 2.687
 OE2
 O
GLU B:258 B:290 156.0 0.821 G -74.9 -34.0 NA NA NA
3pbe 1 Q16769 99.7 0.0 X-RAY
 2011-02-02 GLU A:258 A:290 171.0 0.9 T -57.3 -33.4 171.0 0.9 0.0 HOH
 2.903
 N
 O
GLU B:258 B:290 179.0 0.942 G -69.5 -32.6 NA NA NA
2zem 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 168.0 0.884 T -58.5 -39.6 168.0 0.884 0.0 HOH
 2.912
 N
 O
GLU B:258 B:290 165.0 0.868 G -77.9 -20.2 NA NA NA
2zen 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 168.0 0.884 T -58.6 -36.1 168.0 0.884 0.0 HOH
 2.949
 N
 O
GLU B:258 B:290 163.0 0.858 T -72.0 -31.2 NA NA NA
2zel 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 168.0 0.884 T -59.4 -35.5 168.0 0.884 0.0 HOH
 3.012
 N
 O
GLU B:258 B:290 162.0 0.853 T -67.3 -27.8 NA NA NA
2zeg 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 171.0 0.9 T -58.8 -38.2 171.0 0.9 0.0 HOH
 2.885
 OE1
 O
GLU B:258 B:290 175.0 0.921 G -64.2 -30.8 NA NA NA
2zep 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 GLU A:258 A:290 173.0 0.911 T -60.5 -35.7 173.0 0.911 0.0 HOH
 2.607
 OE1
 O
GLU B:258 B:290 157.0 0.826 T -60.7 -53.2 NA NA NA
7cm0 1 Q16769 100.0 0.0 X-RAY
 2021-12-22 GLU A:256 A:290 163.0 0.858 S -91.7 -27.4 163.0 0.858 0.0 HOH
 5.921
 O
 O
GLU B:256 B:290 162.0 0.853 T -91.1 -26.0 NA NA NA
GLU C:256 C:290 168.0 0.884 T -88.2 -26.3 NA NA NA
GLU D:256 D:290 161.0 0.847 S -92.0 -26.6 NA NA NA
2afs 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 GLU A:258 A:290 170.0 0.895 T -56.4 -38.8 170.0 0.895 0.0 HOH
 2.946
 N
 O
GLU B:258 B:290 165.0 0.868 G -69.0 -26.1 NA NA NA
6yi1 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 GLU A:258 A:290 176.0 0.926 T -61.2 -38.8 176.0 0.926 0.0 SO4
ZN
66N
HOH
 9.629
9.366
7.307
5.606
 N
N
N
CB
 O2
ZN
C35
O
GLU B:258 B:290 176.0 0.926 T -62.3 -35.0 NA NA NA
6yjy 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 GLU A:258 A:290 170.0 0.895 T -57.3 -36.2 170.0 0.895 0.0 HOH
 3.452
 CB
 O
GLU B:258 B:290 175.0 0.921 T -66.9 -31.5 NA NA NA
4yu9 1 Q16769 99.39 0.0 X-RAY
 2015-08-05 GLU A:258 A:290 108.0 NA T -55.7 -32.7 108.0 NA NA HOH
 2.876
 CB
 O
GLU B:258 B:290 109.0 NA T -55.6 -33.9 NA NA NA
GLU C:258 C:290 105.0 NA T -56.3 -38.9 NA NA NA
6gbx 1 Q16769 99.39 0.0 X-RAY
 2018-09-19 GLU A:258 A:290 188.0 0.989 T -74.1 -27.5 188.0 0.989 0.0 HOH
 2.632
 O
 O
GLU B:258 B:290 187.0 0.984 T -71.9 -22.2 NA NA NA
GLU C:258 C:290 175.0 0.921 T -64.5 -31.5 NA NA NA
7d8e 1 Q16769 99.39 0.0 X-RAY
 2021-12-08 GLU A:258 A:290 99.0 NA G -79.2 -8.4 99.0 NA NA HOH
 8.652
 C
 O
GLU B:258 B:290 192.0 1.0 G -88.6 -9.1 NA NA NA
GLU C:258 C:290 186.0 0.979 G -78.9 -20.2 NA NA NA
7coz 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 GLU A:256 A:290 175.0 0.921 T -74.6 -23.9 175.0 0.921 0.0 HOH
 5.699
 O
 O
GLU B:256 B:290 173.0 0.911 T -74.7 -14.9 NA NA NA
GLU C:256 C:290 188.0 0.989 T -77.3 -12.9 NA NA NA
7cp0 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 GLU A:256 A:290 181.0 0.953 T -62.5 -26.4 181.0 0.953 0.0 HOH
 2.612
 O
 O
GLU B:256 B:290 179.0 0.942 G -71.6 -2.9 NA NA NA
GLU C:256 C:290 107.0 NA T -67.8 -22.4 NA NA NA
3si0 1 Q16769 100.0 0.0 X-RAY
 2011-06-29 GLU A:259 A:290 176.0 0.926 T -79.7 -29.0 176.0 0.926 0.0 HOH
 2.727
 O
 O
3si2 1 B2RX76 86.24 0.0 X-RAY
 2011-06-29 GLU A:256 A:291 157.0 0.826 G -63.4 -37.8 157.0 0.826 0.0 HOH
 2.533
 OE2
 O
3si1 1 Q9CYK2 85.93 0.0 X-RAY
 2011-06-29 GLU A:256 A:291 162.0 0.853 T -102.6 5.1 162.0 0.853 0.0 HOH
 2.433
 OE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16769-f1 1 Q16769 100.0 0.0 GLU A:290 A:290 190.0 1.0 T -71.2 -40.0