Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 37599896 . A C CCDS1790.1:NM_012413.3:c.1012Aat>Cat_NP_036545.1:p.338N>H Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ywy 1 Q16769 99.45 0.0 X-RAY
 2015-08-05 ASN A:338 A:338 74.0 0.463 T -90.4 7.2 74.0 0.463 0.0 HOH
 2.696
 O
 O
ASN B:338 B:338 72.0 0.45 G -89.5 3.6 NA NA NA
ASN C:338 C:338 76.0 0.475 G -88.6 4.7 NA NA NA
2afm 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ASN A:306 A:338 65.0 0.406 G -89.7 3.6 65.0 0.406 0.0 HOH
 2.647
 ND2
 O
ASN B:306 B:338 66.0 0.412 G -90.0 3.0 NA NA NA
2afo 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ASN A:306 A:338 68.0 0.425 G -94.2 11.5 68.0 0.425 0.0 HOH
 2.667
 ND2
 O
ASN B:306 B:338 66.0 0.412 T -88.8 4.0 NA NA NA
2afw 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ASN A:306 A:338 65.0 0.406 T -90.0 4.6 65.0 0.406 0.0 HOH
 2.623
 ND2
 O
ASN B:306 B:338 66.0 0.412 G -91.3 2.7 NA NA NA
2afx 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ASN A:306 A:338 63.0 0.394 T -89.5 4.9 63.0 0.394 0.0 HOH
 2.635
 ND2
 O
ASN B:306 B:338 65.0 0.406 G -90.8 -0.9 NA NA NA
2afz 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 ASN A:306 A:338 66.0 0.412 T -88.4 3.7 66.0 0.412 0.0 HOH
 2.607
 ND2
 O
ASN B:306 B:338 67.0 0.419 G -90.3 2.4 NA NA NA
3pbb 1 Q16769 100.0 0.0 X-RAY
 2011-02-02 ASN A:306 A:338 73.0 0.456 G -92.5 1.2 73.0 0.456 0.0 HOH
 3.122
 O
 O
ASN B:306 B:338 60.0 0.375 G -89.6 -1.4 NA NA NA
2zef 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 67.0 0.419 T -87.7 3.3 67.0 0.419 0.0 HOH
 2.630
 OD1
 O
ASN B:306 B:338 67.0 0.419 G -89.2 3.0 NA NA NA
2zed 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 66.0 0.412 T -88.8 1.0 66.0 0.412 0.0 HOH
 2.713
 OD1
 O
ASN B:306 B:338 66.0 0.412 G -87.8 0.8 NA NA NA
2afu 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 ASN A:306 A:338 65.0 0.406 G -93.5 13.2 65.0 0.406 0.0 HOH
 2.623
 O
 O
ASN B:306 B:338 66.0 0.412 G -92.2 5.1 NA NA NA
2zeh 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 65.0 0.406 T -85.3 3.5 65.0 0.406 0.0 HOH
 2.685
 OD1
 O
ASN B:306 B:338 64.0 0.4 T -87.9 1.5 NA NA NA
2zeo 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 61.0 0.381 G -90.5 4.6 61.0 0.381 0.0 HOH
 2.636
 ND2
 O
ASN B:306 B:338 67.0 0.419 G -91.2 2.6 NA NA NA
2zee 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 67.0 0.419 T -87.6 7.5 67.0 0.419 0.0 HOH
 2.650
 O
 O
ASN B:306 B:338 69.0 0.431 G -93.0 5.7 NA NA NA
3pbe 1 Q16769 99.7 0.0 X-RAY
 2011-02-02 ASN A:306 A:338 77.0 0.481 T -85.5 2.7 77.0 0.481 0.0 HOH
 2.551
 OD1
 O
ASN B:306 B:338 71.0 0.444 T -87.6 -2.2 NA NA NA
2zem 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 60.0 0.375 G -90.7 11.1 60.0 0.375 0.0 HOH
 2.569
 O
 O
ASN B:306 B:338 66.0 0.412 G -88.3 4.1 NA NA NA
2zen 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 65.0 0.406 G -88.6 3.2 65.0 0.406 0.0 HOH
 2.656
 ND2
 O
ASN B:306 B:338 65.0 0.406 G -90.8 1.9 NA NA NA
2zel 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 68.0 0.425 G -93.6 8.3 68.0 0.425 0.0 HOH
 2.687
 ND2
 O
ASN B:306 B:338 70.0 0.438 G -91.9 4.8 NA NA NA
2zeg 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 61.0 0.381 G -90.9 10.2 61.0 0.381 0.0 HOH
 2.618
 O
 O
ASN B:306 B:338 64.0 0.4 G -89.9 6.1 NA NA NA
2zep 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 ASN A:306 A:338 59.0 0.369 G -94.0 11.4 59.0 0.369 0.0 HOH
 2.683
 ND2
 O
ASN B:306 B:338 65.0 0.406 G -94.3 2.9 NA NA NA
7cm0 1 Q16769 100.0 0.0 X-RAY
 2021-12-22 ASN A:304 A:338 80.0 0.5 G -101.5 21.9 80.0 0.5 0.0 HOH
 9.973
 CB
 O
ASN B:304 B:338 76.0 0.475 G -102.2 23.8 NA NA NA
ASN C:304 C:338 78.0 0.487 G -101.2 26.3 NA NA NA
ASN D:304 D:338 78.0 0.487 G -101.1 22.5 NA NA NA
2afs 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 ASN A:306 A:338 62.0 0.388 G -87.7 12.2 62.0 0.388 0.0 HOH
 2.681
 O
 O
ASN B:306 B:338 68.0 0.425 G -92.3 4.2 NA NA NA
6yi1 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 ASN A:306 A:338 60.0 0.375 G -99.0 3.6 60.0 0.375 0.0 PEG
HOH
 8.231
2.956
 ND2
O
 O4
O
ASN B:306 B:338 68.0 0.425 T -90.8 3.5 NA NA NA
6yjy 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 ASN A:306 A:338 68.0 0.425 G -93.1 4.9 68.0 0.425 0.0 SO4
HOH
 6.763
2.448
 ND2
OD1
 O3
O
ASN B:306 B:338 67.0 0.419 G -92.8 2.4 NA NA NA
4yu9 1 Q16769 99.39 0.0 X-RAY
 2015-08-05 ASN A:306 A:338 59.0 0.369 T -87.5 0.9 59.0 0.369 0.0 HOH
 2.845
 O
 O
ASN B:306 B:338 73.0 0.456 G -91.0 5.1 NA NA NA
ASN C:306 C:338 70.0 0.438 T -82.7 -1.4 NA NA NA
6gbx 1 Q16769 99.39 0.0 X-RAY
 2018-09-19 ASN A:306 A:338 74.0 0.463 G -92.9 -1.2 74.0 0.463 0.0 HOH
 2.672
 ND2
 O
ASN B:306 B:338 74.0 0.463 G -92.0 1.1 NA NA NA
ASN C:306 C:338 76.0 0.475 G -94.3 1.6 NA NA NA
7d8e 1 Q16769 99.39 0.0 X-RAY
 2021-12-08 ASN A:306 A:338 74.0 0.463 G -90.9 4.2 74.0 0.463 0.0 HOH
 2.879
 O
 O
ASN B:306 B:338 73.0 0.456 G -94.1 7.6 NA NA NA
ASN C:306 C:338 69.0 0.431 G -97.6 1.8 NA NA NA
7coz 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 ASN A:304 A:338 77.0 0.481 G -93.9 1.8 77.0 0.481 0.0 HOH
 2.748
 O
 O
ASN B:304 B:338 78.0 0.487 G -93.1 1.0 NA NA NA
ASN C:304 C:338 79.0 0.494 G -92.5 0.9 NA NA NA
7cp0 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 ASN A:304 A:338 72.0 0.45 G -92.9 1.4 72.0 0.45 0.0 HOH
 2.808
 O
 O
ASN B:304 B:338 67.0 0.419 G -89.7 1.4 NA NA NA
ASN C:304 C:338 71.0 0.444 G -95.0 2.9 NA NA NA
3si0 1 Q16769 100.0 0.0 X-RAY
 2011-06-29 ASN A:307 A:338 69.0 0.431 T -90.3 13.6 69.0 0.431 0.0 HOH
 2.561
 O
 O
3si2 1 B2RX76 86.24 0.0 X-RAY
 2011-06-29 ASN A:304 A:339 76.0 0.475 G -90.7 3.8 76.0 0.475 0.0 HOH
 2.652
 O
 O
3si1 1 Q9CYK2 85.93 0.0 X-RAY
 2011-06-29 ASN A:304 A:339 49.0 0.306 S -81.2 70.2 49.0 0.306 0.0 HOH
 2.800
 ND2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16769-f1 1 Q16769 100.0 0.0 ASN A:338 A:338 73.0 0.456 G -100.2 9.3