Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 37599942 . T A CCDS1790.1:NM_012413.3:c.1058gTc>gAc_NP_036545.1:p.353V>D Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ywy 1 Q16769 99.45 0.0 X-RAY
 2015-08-05 VAL A:353 A:353 0.0 0.0 H -65.3 -48.2 0.0 0.0 0.0 HOH
 4.312
 CG1
 O
VAL B:353 B:353 1.0 0.006 H -56.2 -47.9 NA NA NA
VAL C:353 C:353 1.0 0.006 H -59.2 -46.1 NA NA NA
2afm 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 VAL A:321 A:353 1.0 0.006 H -62.3 -44.2 1.0 0.006 0.0 HOH
 4.331
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -61.7 -47.7 NA NA NA
2afo 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 VAL A:321 A:353 1.0 0.006 H -62.2 -42.2 1.0 0.006 0.0 HOH
 4.683
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -72.0 -38.9 NA NA NA
2afw 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 VAL A:321 A:353 1.0 0.006 H -62.1 -43.8 1.0 0.006 0.0 HOH
 4.297
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -63.6 -48.0 NA NA NA
2afx 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 VAL A:321 A:353 1.0 0.006 H -63.2 -44.8 1.0 0.006 0.0 HOH
 4.343
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -61.9 -46.1 NA NA NA
2afz 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 VAL A:321 A:353 1.0 0.006 H -62.8 -44.6 1.0 0.006 0.0 HOH
 4.342
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -65.0 -47.9 NA NA NA
3pbb 1 Q16769 100.0 0.0 X-RAY
 2011-02-02 VAL A:321 A:353 1.0 0.006 H -54.8 -49.7 1.0 0.006 0.0 HOH
 6.305
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -60.1 -48.7 NA NA NA
2zef 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -62.7 -44.3 1.0 0.006 0.0 HOH
 4.380
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -62.7 -47.8 NA NA NA
2zed 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -62.4 -43.6 1.0 0.006 0.0 HOH
 4.406
 CG1
 O
VAL B:321 B:353 2.0 0.013 H -61.6 -44.9 NA NA NA
2afu 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 VAL A:321 A:353 0.0 0.0 H -65.9 -47.3 0.0 0.0 0.0 HOH
 4.788
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -67.3 -47.3 NA NA NA
2zeh 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -61.0 -45.5 1.0 0.006 0.0 HOH
 4.324
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -65.1 -46.3 NA NA NA
2zeo 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -61.0 -46.3 1.0 0.006 0.0 HOH
 4.411
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -64.4 -45.7 NA NA NA
2zee 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -60.7 -46.1 1.0 0.006 0.0 HOH
 4.525
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -64.4 -43.3 NA NA NA
3pbe 1 Q16769 99.7 0.0 X-RAY
 2011-02-02 VAL A:321 A:353 0.0 0.0 H -60.2 -47.1 0.0 0.0 0.0 HOH
 4.476
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -65.6 -46.0 NA NA NA
2zem 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -62.1 -46.4 1.0 0.006 0.0 HOH
 4.705
 CG1
 O
VAL B:321 B:353 2.0 0.013 H -69.9 -45.0 NA NA NA
2zen 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -61.1 -45.9 1.0 0.006 0.0 HOH
 4.578
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -63.9 -45.7 NA NA NA
2zel 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -62.9 -43.4 1.0 0.006 0.0 HOH
 4.438
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -64.9 -43.0 NA NA NA
2zeg 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -64.9 -39.3 1.0 0.006 0.0 HOH
 4.661
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -62.6 -46.7 NA NA NA
2zep 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 VAL A:321 A:353 1.0 0.006 H -64.0 -42.9 1.0 0.006 0.0 HOH
 4.562
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -61.7 -50.4 NA NA NA
7cm0 1 Q16769 100.0 0.0 X-RAY
 2021-12-22 VAL A:319 A:353 2.0 0.013 H -72.8 -38.8 2.0 0.013 0.0 HOH
 7.130
 CG1
 O
VAL B:319 B:353 2.0 0.013 H -72.3 -40.0 NA NA NA
VAL C:319 C:353 2.0 0.013 H -72.9 -40.7 NA NA NA
VAL D:319 D:353 1.0 0.006 H -73.6 -39.7 NA NA NA
2afs 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 VAL A:321 A:353 1.0 0.006 H -62.6 -41.8 1.0 0.006 0.0 HOH
 4.610
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -67.0 -49.0 NA NA NA
6yi1 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 VAL A:321 A:353 1.0 0.006 H -63.4 -47.2 1.0 0.006 0.0 PG4
HOH
 8.403
4.952
 CG1
CG1
 C1
O
VAL B:321 B:353 0.0 0.0 H -59.8 -48.7 NA NA NA
6yjy 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 VAL A:321 A:353 1.0 0.006 H -58.7 -45.4 1.0 0.006 0.0 HOH
 4.316
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -59.7 -46.4 NA NA NA
4yu9 1 Q16769 99.39 0.0 X-RAY
 2015-08-05 VAL A:321 A:353 0.0 0.0 H -57.9 -49.7 0.0 0.0 0.0 HOH
 4.214
 CG1
 O
VAL B:321 B:353 0.0 0.0 H -62.6 -46.2 NA NA NA
VAL C:321 C:353 0.0 0.0 H -53.1 -46.8 NA NA NA
6gbx 1 Q16769 99.39 0.0 X-RAY
 2018-09-19 VAL A:321 A:353 1.0 0.006 H -58.7 -45.6 1.0 0.006 0.0 HOH
 4.264
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -60.2 -46.5 NA NA NA
VAL C:321 C:353 0.0 0.0 H -57.4 -49.1 NA NA NA
7d8e 1 Q16769 99.39 0.0 X-RAY
 2021-12-08 VAL A:321 A:353 1.0 0.006 H -59.1 -43.2 1.0 0.006 0.0 HOH
 4.340
 CG1
 O
VAL B:321 B:353 1.0 0.006 H -62.0 -49.5 NA NA NA
VAL C:321 C:353 2.0 0.013 H -61.5 -45.6 NA NA NA
7coz 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 VAL A:319 A:353 1.0 0.006 H -57.9 -47.8 1.0 0.006 0.0 HOH
 4.643
 CG1
 O
VAL B:319 B:353 1.0 0.006 H -59.4 -48.4 NA NA NA
VAL C:319 C:353 0.0 0.0 H -59.4 -49.7 NA NA NA
7cp0 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 VAL A:319 A:353 1.0 0.006 H -61.2 -45.8 1.0 0.006 0.0 HOH
 4.360
 CG1
 O
VAL B:319 B:353 1.0 0.006 H -62.0 -47.3 NA NA NA
VAL C:319 C:353 1.0 0.006 H -57.1 -47.3 NA NA NA
3si0 1 Q16769 100.0 0.0 X-RAY
 2011-06-29 VAL A:322 A:353 1.0 0.006 H -63.7 -48.8 1.0 0.006 0.0 HOH
 5.295
 CG1
 O
3si2 1 B2RX76 86.24 0.0 X-RAY
 2011-06-29 VAL A:319 A:354 0.0 0.0 H -59.2 -49.3 0.0 0.0 0.0 HOH
 4.798
 CG1
 O
3si1 1 Q9CYK2 85.93 0.0 X-RAY
 2011-06-29 VAL A:319 A:354 17.0 0.11 H -86.3 -65.5 17.0 0.11 0.0 HOH
 7.054
 CG1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16769-f1 1 Q16769 100.0 0.0 VAL A:353 A:353 0.0 0.0 H -60.4 -47.9